Clone Read LE_HBa0229E06_SP6_388906

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0229E06_SP6_388906
Primer
SP6
ID from Seq. Facility
LE_HBa_229_E06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
776 trimmed for vector and quality, 994 raw
Sequence
>LE_HBa0229E06_SP6_388906 (raw untrimmed)
NATAACGGGNNNNGGCATATATTTTTTTCAAATCTTCTTTCGCTAGATAAAAACTAAAATTAGATTGGTTAAAATATAAAATTTAACAAAATTTTTAAGT
AAACTCCATAAAAAAAGGATGAGAAAGAGAAAATCCAAAAAAGAATTAGAAATTGCTAAAAGAGAAATTGATGTTGAAGCAAAAAAGAATTAGAAATTGC
TAAAAGAGAAATTGACGTTGAAGTTGTAGTTGTTGTTAATGTTGCGAACCCGTCCAAATTCTGATAATGATAAACATTGCTTGGGAAAGAAAGAAAGAAA
AATATAAATTTAACTTTAAAAGTAGCTTCCTATTAGACTATTCTATATATGCATAATATATAATTCTTGTTGTACTGTATGCACATTTTTCTTTCCATTT
ATTGTACTGGGGAATACACACCACATTAACATTTTGTTTCTATTATTACTGTAACATATTTTGATTCCTAAATTGATATATGTATCACTCAATTTTTAAA
ATTAAGTTTTCTAAAATTTTGTTTCATAATCTATAATTTTTAGTTTTATCTTTTTCTTATTTTTCATCATTTTTTATTTTTAGTACAAGATTATATGTAG
TAATATTATTATTTATAATAAATTAACTCAATAATATTAACCATGTGATTTCAATACAATACCATGGATGTTATTATAAAAATATTAATTATTGCTGTGG
AAATTTCACAACTTTAAGTTCAAAACTTAAAAATATTTTTGTTAAAAGTTAAAATAATTTTTTCTTTCTTTCTTTTTATATACTTTTTCTTTTGGAAAAA
TTGTGTATAAATACAAACNTATAAATCAAATTAATTGGTATAATCATCCTTTGATTTATTTGTGTCACGTAACAAACTGTTTGCAGTCACCTCTCTCATT
CAAACTCTCGCTCGCCACTCTCCCCCTTTGCTCCATCTCTCGCTCGCTTTCTCCTACTTTTATCAAACCCAATGTATAAAATTCGTTTCAATTG
>LE_HBa0229E06_SP6_388906 (trimmed for quality and cloning vector)
ATCTTCTTTCGCTAGATAAAAACTAAAATTAGATTGGTTAAAATATAAAATTTAACAAAATTTTTAAGTAAACTCCATAAAAAAAGGATGAGAAAGAGAA
AATCCAAAAAAGAATTAGAAATTGCTAAAAGAGAAATTGATGTTGAAGCAAAAAAGAATTAGAAATTGCTAAAAGAGAAATTGACGTTGAAGTTGTAGTT
GTTGTTAATGTTGCGAACCCGTCCAAATTCTGATAATGATAAACATTGCTTGGGAAAGAAAGAAAGAAAAATATAAATTTAACTTTAAAAGTAGCTTCCT
ATTAGACTATTCTATATATGCATAATATATAATTCTTGTTGTACTGTATGCACATTTTTCTTTCCATTTATTGTACTGGGGAATACACACCACATTAACA
TTTTGTTTCTATTATTACTGTAACATATTTTGATTCCTAAATTGATATATGTATCACTCAATTTTTAAAATTAAGTTTTCTAAAATTTTGTTTCATAATC
TATAATTTTTAGTTTTATCTTTTTCTTATTTTTCATCATTTTTTATTTTTAGTACAAGATTATATGTAGTAATATTATTATTTATAATAAATTAACTCAA
TAATATTAACCATGTGATTTCAATACAATACCATGGATGTTATTATAAAAATATTAATTATTGCTGTGGAAATTTCACAACTTTAAGTTCAAAACTTAAA
AATATTTTTGTTAAAAGTTAAAATAATTTTTTCTTTCTTTCTTTTTATATACTTTTTCTTTTGGAAAAATTGTGTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.864139
Expected error %
0.202934
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0229E06
Clone
Clone name
hba-229e6
LE_HBa0229E06
P229E06
Clone type
BAC
Contamination
none
Estimated length
114,421
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found