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Clone Read LE_HBa0009A18_T7_3875

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0009A18_T7_3875
Primer
T7
ID from Seq. Facility
LE_HBa_009_A18-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 947 raw
Sequence
>LE_HBa0009A18_T7_3875 (raw untrimmed)
GAGGTTTTTTTCCCCCAACTACCCCCAAGAGGGGGGAGGGCGCCCTTTCTTTTCGCGGGGGGGGGCCGCCAGGAGGAAGGGGGGAAGACGAGGAGGGAGA
GGGCACNCGCNGCAGGCGGAAGCACCCGAAAACTTCCCCGACGGGAAGGNAGGGNANNGATTTTTNAAAANANNAANAAANAGGGAGAGAAGAGAAAAAA
AAGAGAGGAGAGGAGAAGAGGAAGGGAAGAGGGGAGAGAGAAAAAAGAAAGAGAAGGAAAGAAGGGGAGGAGAGAAGAAGGAAAGAAGAGGAGAAAAGAA
GAAAAAAAAAAAGAAGAAAAAGGGGAGGAGAAAAGAGAGAAGAAGGAAGAGGGAGAGAGAAGAAGGAAAAAGAAAGAGAAAAAAAGAAGAAGAAAAAGAG
GAAAAAAAAAAAAGAAGAGAAAAAGGAAAAGAGAAAAAAGAGAGAGAGAAGAAAGAGAGGGGAAGGGGGGNAGAAAAAGAAAGAGAGAAAAGAAGAAGAG
GAGGAAGAAAAAGAAAGAGGGAGGGGAAAAAGAAAAAGGAAGAAAAAGAAGAGAGAAGGAAAGAAAAGAGAGAGAGAGANGAGAGAAGAAAGGGAAGAAA
GAAGAGGAGAAAGAAAAGAAGGAGGAAGGAGGAAGNGAGGGAAAGAGGAGAGAGAAGNAAAGAGANANANANAAGAGGGAAGGAAGAAAAAGAAAAAAAA
AAAGAGAAAGAAAGNAGGAAAAAGAAGAGAAAAAAAGAAAGAGAAGAAAGAAGAAGGAAAAAGGAGAGGAGAGAGAAGAGAGGAGAGAGAGGAGGAGAGA
GAAGAAAGAGGAGGAGAAAGAGGGGAAGGAAAGAAGGAAGGGAGAAAGGAGAGGAAAGAGAGAGGAAAAAAAAAAAAAGAAAAAAGAGANGAAAGAAAAG
AAAAGAGAAAGAGAAAAAAAAAGAAAAAAAAAAGAAANAGGGGGAGA
>LE_HBa0009A18_T7_3875 (trimmed for quality and cloning vector)
TTTTC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.575843
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0009A18
Clone
Clone name
hba-9a18
LE_HBa0009A18
C02HBa0009A18
P009A18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found