Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0114P05_SP6_38744

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0114P05_SP6_38744
Primer
SP6
ID from Seq. Facility
LE_HBa_114_P05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
640 trimmed for vector and quality, 751 raw
Sequence
>LE_HBa0114P05_SP6_38744 (raw untrimmed)
TTTTTTACTTTCTTCTTCATAGAGCTACTGTTCACTAAGAATTTAGAGATAAGTTAAAGAAATTGGGTTTTTAATTTGGGGATTTGTTATGGTGTGGGAA
TGGGTATAAAATAAGTTAAATTCAATGCATAAAAAGCCACTAAAATACCTAAAACGTCCCTCACATAGATTGACCTTTTAATTCAGTCTATTTTGACTTT
TATTTTCAGAGTTTTCATCCCGAAACAGGTTTGCATCATGGAGGTGTTCCCTAGAGCTTCTGGAAATTAATTTGGGGACAGAGAGGTTCTTGAAGCGGAC
CAACATTTGCGCCTTTGGTGGAGGCAGTACGCAACATGGACCTATTAGCGTGGAAACTTAAAACATACGATACACTAAAAATGATAAAATGGGGAATACC
CCTATACGATAACTTCAATATATGAAAAGTTGATAAGTTTATTATAAGGATGATATCAAATATATAGGCTGAAGTTGAAACCAACGATGTTTTGAAATAA
ACCTCTATTATCTAGAAGGGCTAGAGATGCTCTTGCTAAGTCTAGCATAACTAAAACTAAAGCTACAAGAGATAAGGATAAACGTGTCACTAGTCCTCCA
AGAATGAGGACTCACTACTAGTGCTGCTCAACTTATGATCGGGAACCAATCTAAGCGTGATCTAGATGCTGAGAACCGGAACCTACCTCAAAGTAAGATG
TAGCACATAGTAAGTGGTCGTTCTTGGAAGGTACTAAGAATGAAAGGTCAA
>LE_HBa0114P05_SP6_38744 (trimmed for quality and cloning vector)
GAGCTACTGTTCACTAAGAATTTAGAGATAAGTTAAAGAAATTGGGTTTTTAATTTGGGGATTTGTTATGGTGTGGGAATGGGTATAAAATAAGTTAAAT
TCAATGCATAAAAAGCCACTAAAATACCTAAAACGTCCCTCACATAGATTGACCTTTTAATTCAGTCTATTTTGACTTTTATTTTCAGAGTTTTCATCCC
GAAACAGGTTTGCATCATGGAGGTGTTCCCTAGAGCTTCTGGAAATTAATTTGGGGACAGAGAGGTTCTTGAAGCGGACCAACATTTGCGCCTTTGGTGG
AGGCAGTACGCAACATGGACCTATTAGCGTGGAAACTTAAAACATACGATACACTAAAAATGATAAAATGGGGAATACCCCTATACGATAACTTCAATAT
ATGAAAAGTTGATAAGTTTATTATAAGGATGATATCAAATATATAGGCTGAAGTTGAAACCAACGATGTTTTGAAATAAACCTCTATTATCTAGAAGGGC
TAGAGATGCTCTTGCTAAGTCTAGCATAACTAAAACTAAAGCTACAAGAGATAAGGATAAACGTGTCACTAGTCCTCCAAGAATGAGGACTCACTACTAG
TGCTGCTCAACTTATGATCGGGAACCAATCTAAGCGTGAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.964473
Expected error %
0.107843
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0114P05
Clone
Clone name
hba-114p5
LE_HBa0114P05
P114P05
Clone type
BAC
Contamination
none
Estimated length
102,029
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found