Clone Read LE_HBa0226N06_SP6_386746

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0226N06_SP6_386746
Primer
SP6
ID from Seq. Facility
LE_HBa_226_N06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
643 trimmed for vector and quality, 952 raw
Sequence
>LE_HBa0226N06_SP6_386746 (raw untrimmed)
CCGGCGCTGTCCNANNTTTANTGTGAGTTTGTCTGATGCGGTGTCCTTCTTGGGGCACGTGGTTTCTAAGGATGGAGTGATGGTGGATCCTTCTAAGATT
GAGACAGTGAAGAATTGGGTAAGACCCACTAATGTGTTAGAAATAAGGAGCTTTGTTGGGTTAGCTAGCTACTACCGCCGATTTGTCAAGGGATTCTCTT
CTATTGCTTCCCAATTGACGAACTTGACTAAGCAGAATGTCCCATTTGTATGGTCGGATGAATGTGAGGAAAGCTTTCAGAAGCTCAAGACTTTGTTGAC
TACCGCACCTATCCTTACCTTGCCAGTAGAGGGTAAGAACTTCATTGTTTATTGTGATGCATCCTATTCTGGTTTGGGTGCAGTACTAATGCAAGAGAAG
AGTGTGATTGCTTATGCTTCAAGACAATTAAAAGTGCATGAACGTAACTATCCCACTCATGATTTGGAATTGGCCGCGGTAGTGTTTGCATTAAAACAAT
GGAGACACTATTTATATGGGGTTAAGTGTGAGATCTATACGGATCATCGTAGCCTACAGTATGTCTTTACTCAGAAAGATTTGAACTTAAGACAGAGGAG
ATGGATGGAGTTACTAAAGGACTACGATATCACTATCTTGTATCATCCGGGGAAGGCGAATGTTGTAGCGGATGCTTTAAGTAGAAAGGCGGGAAGCATG
GGAAGTCTAGCTCACATGCAAGCTTCTTGACCCCCATTGGGTAGAGAGGTTCAAACTCTAGCTAATGACTTGATGAGATTAAAGTTAATGAGAAGGGAGG
AATTGTTGCTTCCTTTGGAGGCAAGATTTTTCCTTTTCTTGACAAATTTAGGGGAAAAACATTTTTAATATTGAAAAGCTTAAGGCCAATCCCAAGATAA
AGTTTTGCCCAAGGTGGAGGCCTAAGGAAACCCACAATTCCTTTGGAGGAAG
>LE_HBa0226N06_SP6_386746 (trimmed for quality and cloning vector)
GATGCGGTGTCCTTCTTGGGGCACGTGGTTTCTAAGGATGGAGTGATGGTGGATCCTTCTAAGATTGAGACAGTGAAGAATTGGGTAAGACCCACTAATG
TGTTAGAAATAAGGAGCTTTGTTGGGTTAGCTAGCTACTACCGCCGATTTGTCAAGGGATTCTCTTCTATTGCTTCCCAATTGACGAACTTGACTAAGCA
GAATGTCCCATTTGTATGGTCGGATGAATGTGAGGAAAGCTTTCAGAAGCTCAAGACTTTGTTGACTACCGCACCTATCCTTACCTTGCCAGTAGAGGGT
AAGAACTTCATTGTTTATTGTGATGCATCCTATTCTGGTTTGGGTGCAGTACTAATGCAAGAGAAGAGTGTGATTGCTTATGCTTCAAGACAATTAAAAG
TGCATGAACGTAACTATCCCACTCATGATTTGGAATTGGCCGCGGTAGTGTTTGCATTAAAACAATGGAGACACTATTTATATGGGGTTAAGTGTGAGAT
CTATACGGATCATCGTAGCCTACAGTATGTCTTTACTCAGAAAGATTTGAACTTAAGACAGAGGAGATGGATGGAGTTACTAAAGGACTACGATATCACT
ATCTTGTATCATCCGGGGAAGGCGAATGTTGTAGCGGATGCTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.976043
Expected error %
0.232515
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0226N06
Clone
Clone name
hba-226n6
LE_HBa0226N06
P226N06
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found