Clone Read LE_HBa0210H05_SP6_386684

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0210H05_SP6_386684
Primer
SP6
ID from Seq. Facility
LE_HBa_210_H05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1221 raw
Sequence
>LE_HBa0210H05_SP6_386684 (raw untrimmed)
GGGGNNAACATTACGANAGNGNNNATAATGCCCAGACTCCACAANTNGNGTAGACAGACTGATTGTACCCGNTTATTTATCAACACCCCTTTAAAGGGAG
ATTTATAGNTTTTCCTGTGGTGAGTTATGATGTGTTACACCTCTTTAAAGGGAGGGTATGTAGCATTAAGAGGGTAGAGATTTACAATTGTTATTCCGTA
GTTAATCTAGTCGGTGAATACTCATCATTAATGCGCAACAGATACACATATGCCATGCACACCAATCAATGTACTTTGACGAAAATTCAATCACGTTCAT
TATATTGGGATATCTCTAAATAAACGAACTCGGTCTTGTGACAAAGAGTTCTGCAACGTGATAGGTTCGACTGGCAAAACGTACGCAAGGTGTGATCAAT
CAGGTTAAATCTGAGATATATGATCCAATAATAGGCATACTGTCGTGAAGACAAATATGTCCTAACTGAATTGTCTTTGTGAAGGTATATTTCAAACATA
TTTAGACTAAGAAGAGTACTGTCCCCTAGTACCTGAACACTAATTACATGTATTGGCATCGTTTTAGTCAATGATAACTATGTAGACTGTCAAAAAGGGC
AAATGTGTTGTTGATTATTGTACCACTCTAATGATTCTGCAATCGCTAGAACTTACTCATATATACGAAAATTTGTACTAAGCGTACATCCATATGGTTC
TTCACCTTTTTTGACAACTTACACGTGTTTCATACTTTTATCTTGTCAGTTGTGAAAGAGAGATAAGCTCATCGTCACAATATTTCTTAGTATCCATGTT
AGATATTTCGTAAACCTACGCAGGCTATAATTACCCTTCAGTCATTCTTGACCTCTCAGACCTATATGAACATTCTACTTCATTGATCATCACCCGTTCT
TATAGCTATTCTGTATATACTTCTCGAGTTAATAAACAATTTATTGTGGACTATCACATATTACTCTATAATGATGATATCGTTATTATACTTGTTCTAC
ATCGAGATTCCAATTCCTTACTAGTATCATAGTGTAGCACTACACTTTATGGATCTTTTGGAATAGTCTTTAGATATATATAGCGATCGATATTCACATG
TAGTGTTTATTTGCGTCTCTGTATGAATCATGAATAACTATCTGAAAATTGATATTAGAATGTACGCTTGCTGCTAACTCACATTGCTTGTATAAATTTA
ACATGTAGAGCATATTAAACG
>LE_HBa0210H05_SP6_386684 (trimmed for quality and cloning vector)
AT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.40538
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0210H05
Clone
Clone name
hba-210h5
LE_HBa0210H05
P210H05
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found