Clone Read LE_HBa0226M05_T7_386647

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0226M05_T7_386647
Primer
T7
ID from Seq. Facility
LE_HBa_226_M05-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
12 trimmed for vector and quality, 841 raw
Sequence
>LE_HBa0226M05_T7_386647 (raw untrimmed)
GGACCGGGCCGAGGCGCGCCTCTTTTCTGTTTGAAGTGCTTGGGTACGAGAGATGTTTGTTTCTTTTATGCGTGTTGAAAACATGGGAGCTTTGGGGATG
GACGGAGGGATATGGCCTCCAAAGAACGCAGTGAAAATGTAATCTAAGGGCATCGTGAAATCGATCCACCTTCTCCTCAGTATAACATGTCTTGATCCCC
TACGGATTTCTGAAACCTCCCCTTTACATGCTGTTCAAAGATGACACGACTCCCTGCCCTTTTGTCCTTAAAGTTTTGACGTTCGCACGAAAACGCCCGC
GTGTGGGAGGCCTTCTGTTTTCACTTGGGTGCTTTCCGGGCCTGCTGTTCACTTTATGAGGAGTATTCGAGGAGCGGGTGTCTTTATTGCTTGTGAGGCG
TCTTGAGGTTAGACTTCACACTTAAAAGTGTAGAAACACCCTATGGATCAACAAAAGGGATTAGGG
GCCACTTGAATCTTTACAGCAGCGAGTGTTCTCG
CCCTCGAATAGATTTACGCATGCCCCATTAAGGAAGGCGAAGTTACTCAAGTTTTAAACATAGGATTTGGTATCCCTTTTATAGAAGAGGAAAGAGACCG
AATTTATACGCAAGTTTTACAGGGGAATTTATAATATATTATAAAGCATAGAGTCAAAAAGTTTACCTCCTTGACGTGACTTCCTGCAGTAGCTGATGCT
GTCCGTTTCCTGAGGCCTGGAAGGCAAGGAACTTTGTTTTTACTAGCCCCACGAATGTCATCACTTTTATTAAAGCAACTCCTGGACTTTGTTTTAAAAT
GAAAAGGGGATTAAAATCCCATCTCAAACCGGGGCGTCTTG
>LE_HBa0226M05_T7_386647 (trimmed for quality and cloning vector)
GCCACTTGAATC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.709856
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0226M05
Clone
Clone name
hba-226m5
LE_HBa0226M05
C03HBa0226M05
P226M05
Clone type
BAC
Contamination
none
Estimated length
69,051
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found