Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0114N01_SP6_38640

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0114N01_SP6_38640
Primer
SP6
ID from Seq. Facility
LE_HBa_114_N01-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
714 trimmed for vector and quality, 733 raw
Sequence
>LE_HBa0114N01_SP6_38640 (raw untrimmed)
GTTTTATTTTGGTTCTCATTATTCCTACTCCATGCCTCTATGTCCTGTTAGCATGACCAATGTGCAGTTCAGCACCCTTTTTGAATCAGTGAAGGCACTG
CAAGATTGGGAGAAAGTGATCGCCAGGGAGTCATAGTAGTATGGTCTTTTCCATTTGCCGTATGATCACTACTGTAGGATGAGATGCAATCGGACTCCAC
AATTTCGGATTCTTGTCATCACTTAAACCACCATACATAATCTGAATTTTGAGATTGAGGATGTTGACAAGTGACAACCAACCGTTAGCGATGGAGTCTT
TCACAAATGTTGGTTTTGATACGTATCATTGAACTTTAGAAAAATCTGGTGGTCCATCAAGGCGTAGAAGATGATCCAATTATTTTGGTTGTACTGCAAA
TCTGTGCTCAATAATTTTTTCTTTTTATGAATTTTTGATAAATATACTCGTGCCTGTTGTACAGATTTTCAGAATCATTCACGGCTTGGCAAATAGTGAA
CATATCCACATGTCTGGGGTCTCTCCTGAACTCAATCAGCTCATTTTATGTTCATTGGGATTACGTGGAAGGCGAACTTCCCCTTCAAATGCTTGGAAAC
TTCACTCTTCTCCGAGAATCTTATCATTGGCCAAGAAAGGTTAGTATGAAGTATGAACTATGAACTATGAGTGCCTTACAGAAAATTCTTAAAAAGTTCA
TAACTCTTCATTTTGCACGTTAGTGGCATTGGA
>LE_HBa0114N01_SP6_38640 (trimmed for quality and cloning vector)
TATTCCTACTCCATGCCTCTATGTCCTGTTAGCATGACCAATGTGCAGTTCAGCACCCTTTTTGAATCAGTGAAGGCACTGCAAGATTGGGAGAAAGTGA
TCGCCAGGGAGTCATAGTAGTATGGTCTTTTCCATTTGCCGTATGATCACTACTGTAGGATGAGATGCAATCGGACTCCACAATTTCGGATTCTTGTCAT
CACTTAAACCACCATACATAATCTGAATTTTGAGATTGAGGATGTTGACAAGTGACAACCAACCGTTAGCGATGGAGTCTTTCACAAATGTTGGTTTTGA
TACGTATCATTGAACTTTAGAAAAATCTGGTGGTCCATCAAGGCGTAGAAGATGATCCAATTATTTTGGTTGTACTGCAAATCTGTGCTCAATAATTTTT
TCTTTTTATGAATTTTTGATAAATATACTCGTGCCTGTTGTACAGATTTTCAGAATCATTCACGGCTTGGCAAATAGTGAACATATCCACATGTCTGGGG
TCTCTCCTGAACTCAATCAGCTCATTTTATGTTCATTGGGATTACGTGGAAGGCGAACTTCCCCTTCAAATGCTTGGAAACTTCACTCTTCTCCGAGAAT
CTTATCATTGGCCAAGAAAGGTTAGTATGAAGTATGAACTATGAACTATGAGTGCCTTACAGAAAATTCTTAAAAAGTTCATAACTCTTCATTTTGCACG
TTAGTGGCATTGGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.969713
Expected error %
0.158939
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0114N01
Clone
Clone name
hba-114n1
LE_HBa0114N01
P114N01
Clone type
BAC
Contamination
none
Estimated length
64,654
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found