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Clone Read LE_HBa0226H16_SP6_386216

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0226H16_SP6_386216
Primer
SP6
ID from Seq. Facility
LE_HBa_226_H16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
744 trimmed for vector and quality, 972 raw
Sequence
>LE_HBa0226H16_SP6_386216 (raw untrimmed)
NNNNGGGAATGAGTTAGAGTCGATCAGGGAGAAAACCTTCGCAGTGCAGTCCACTCACAACCCAACCACAGATGATATTCGGGAAGAAATGGCTCAGATG
AGAACTGAGCTTGGGTTGGTACTAAAACATGTCACTGGGGGTGCAGAAAAGGTTAATGCAGTCAACTACTTTGCTAAACCACCACCTCCAATTGATGAGT
GTTATTATGAGGAGGATTCATATGCAGTAAATAAACAGATGGGGCGTTTCCGACCAAGCGCCCAAGGCTCAAATCAGGATAATTGGCGCCAAGGTCAAGG
GAACCAAGGTCGGAACTATGGTAACTACAACCGTGAGGGTCATTATGTCCGAGATGGAAACTACAATCGCGACAACAACTTCAACAGGGGTAGCTATGGT
AATAGAAACGACAGGAGTGGACCCTATGTTCCTCCTCAAAATCGTGAAGTTACTCCTAGGGATGGTGGAGATAGTATGGCGCGAGTTGAGGATATGTTGC
ACAAAATGATGAGGAGGTTCGATGCTAGTGATGAACACATTAAAGAATTAAGGGGTGATTTAGCTAGTATTGGGCAAAAAGTGGACACACACGCAATTTC
GATTAAACAGATCGAATTGCAAGTGGCCCAATTATCTGCGACAGTGAACACACGGCAACCGGGCACTCTTCCTAGCAACACTGTCCAAAATCCAAAGAAT
GATGCACACTGTATGGCAATTACTACTCGGGGTGGTAGGCAAACCATTGACCCACCCATGACATCTGCTGAGAAAATGTAAGAAAAGATAATGAAAAAGT
GGTAAAGGGTAGTGGTGAAACAGATGAAAAGTATGGAAACAATGCAAAATTACCCATCAAGGTAATCCCCATGCCTAGGCCACCAACAACCCTTCCTCAA
AAATTAGTGAAAAAAACTTAGGATGGTAAATACCGGGCCTTTCTAACAAGGGTGAAGCAGCTCTCCTTCAAG
>LE_HBa0226H16_SP6_386216 (trimmed for quality and cloning vector)
ACCTTCGCAGTGCAGTCCACTCACAACCCAACCACAGATGATATTCGGGAAGAAATGGCTCAGATGAGAACTGAGCTTGGGTTGGTACTAAAACATGTCA
CTGGGGGTGCAGAAAAGGTTAATGCAGTCAACTACTTTGCTAAACCACCACCTCCAATTGATGAGTGTTATTATGAGGAGGATTCATATGCAGTAAATAA
ACAGATGGGGCGTTTCCGACCAAGCGCCCAAGGCTCAAATCAGGATAATTGGCGCCAAGGTCAAGGGAACCAAGGTCGGAACTATGGTAACTACAACCGT
GAGGGTCATTATGTCCGAGATGGAAACTACAATCGCGACAACAACTTCAACAGGGGTAGCTATGGTAATAGAAACGACAGGAGTGGACCCTATGTTCCTC
CTCAAAATCGTGAAGTTACTCCTAGGGATGGTGGAGATAGTATGGCGCGAGTTGAGGATATGTTGCACAAAATGATGAGGAGGTTCGATGCTAGTGATGA
ACACATTAAAGAATTAAGGGGTGATTTAGCTAGTATTGGGCAAAAAGTGGACACACACGCAATTTCGATTAAACAGATCGAATTGCAAGTGGCCCAATTA
TCTGCGACAGTGAACACACGGCAACCGGGCACTCTTCCTAGCAACACTGTCCAAAATCCAAAGAATGATGCACACTGTATGGCAATTACTACTCGGGGTG
GTAGGCAAACCATTGACCCACCCATGACATCTGCTGAGAAAATG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.979681
Expected error %
0.109998
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0226H16
Clone
Clone name
hba-226h16
LE_HBa0226H16
P226H16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found