Clone Read LE_HBa0226B01_SP6_385594

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0226B01_SP6_385594
Primer
SP6
ID from Seq. Facility
LE_HBa_226_B01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
596 trimmed for vector and quality, 983 raw
Sequence
>LE_HBa0226B01_SP6_385594 (raw untrimmed)
GGAGCTAGTCTATNTGATTTTAGGTTCTTCTTCTTTCTGGGGTACAGGCGGAGGTGCACTACCAGTTGCTCTCTTTTTTGTTTCTAAGGGATCTGTGTAT
ACAGCTTGGCTCTGATTGCATTGATGAGTGCATTAGAGGGATGTATAAAGCTTATTTATTGAACTGCCAATTCATGAATGCGTCAAAGCTGCAGCATATT
CAATTTCTTGGTAATTGTTTCGTTGAACTCCTTAGGGTGGATCTTCCCAATGCGTACCAGCATGCCTTTGTTTTCATTCGGCAGTTGGCAATGATTTTAC
GGGATGCGCATAGTAGTACTAAGACCAAGGTTTGTTATTTTGTTTCTGATAACTTGTCTTCTTTCTGACTATTTGTTACCAACCATTGATATAAGCTTAT
TCTATAAATCTTTTAGGAGTAAAACTTAAAAAGGTATCTTGTGTAGCACTTTTTTTTTTAAATAACTTTAGATTAAGAATACTTGGCTTAATAGTTCCCA
CATACATGTTAGCTTAATTCATATTTTCACGTTTGAAAAGATGTTCAAAGAGTATCAAGTGGCTTCCGCATTTTACATTACTGGTAGCATCTTATCCTAC
TGAAAGTTATCCTTGCCTTTTAGTGGCCGCTAATTATTGTTATCCCTTTGTCTAATCCTTCCTAGAAATCGTCTAAAAAGGCTAACCCATTCATCCAAGG
GAAGCTCACAATTCCCAAGGGCTAAGGTACCTTTGACTCCTAAACTTGGTCCCCCTTCTTATTTGGTTTTTGGATTATGGCGTCCCCAAAAATGGGGAAC
CTTTTTTAACTTTTCCCCTCTCCTTTAGCCCAACCTTAAAATTTTCTGGGTAAAAAATTTCTCCGGCTTTTTAAAATAGCTTGAACAAAAATTCGCTTTT
TTTGAACCCCTTCTACTTTGCTAAATTTTCTTAAAAACTACACAAACTTATCCTTAAATGAGGCGTTCACGCTTTGAATCACG
>LE_HBa0226B01_SP6_385594 (trimmed for quality and cloning vector)
GTTCTTCTTCTTTCTGGGGTACAGGCGGAGGTGCACTACCAGTTGCTCTCTTTTTTGTTTCTAAGGGATCTGTGTATACAGCTTGGCTCTGATTGCATTG
ATGAGTGCATTAGAGGGATGTATAAAGCTTATTTATTGAACTGCCAATTCATGAATGCGTCAAAGCTGCAGCATATTCAATTTCTTGGTAATTGTTTCGT
TGAACTCCTTAGGGTGGATCTTCCCAATGCGTACCAGCATGCCTTTGTTTTCATTCGGCAGTTGGCAATGATTTTACGGGATGCGCATAGTAGTACTAAG
ACCAAGGTTTGTTATTTTGTTTCTGATAACTTGTCTTCTTTCTGACTATTTGTTACCAACCATTGATATAAGCTTATTCTATAAATCTTTTAGGAGTAAA
ACTTAAAAAGGTATCTTGTGTAGCACTTTTTTTTTTAAATAACTTTAGATTAAGAATACTTGGCTTAATAGTTCCCACATACATGTTAGCTTAATTCATA
TTTTCACGTTTGAAAAGATGTTCAAAGAGTATCAAGTGGCTTCCGCATTTTACATTACTGGTAGCATCTTATCCTACTGAAAGTTATCCTTGCCTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947562
Expected error %
0.353507
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0226B01
Clone
Clone name
hba-226b1
LE_HBa0226B01
C02HBa0226B01
P226B01
Clone type
BAC
Contamination
none
Estimated length
87,836
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found