Clone Read LE_HBa0208F09_T7_385021

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0208F09_T7_385021
Primer
T7
ID from Seq. Facility
LE_HBa_208_F09-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
59 trimmed for vector and quality, 907 raw
Sequence
>LE_HBa0208F09_T7_385021 (raw untrimmed)
AATTGCTTGCATGCTAGATTTTTCTTTTTTTTGATAATTGTCATATCCTTCATGGGTGAAACTCGGAGCAAAATATTATCATCCTCCATGAACATTAGAT
CTCGAA
CTCTCTGATATGCATAAATCTTTTGTTAACCTTACTTATCTATAGTCTACAATGAACATGCCTTACATCATCTTTACAAAAGTCTGTATCTAAT
GGGTTCATCTCACCCGAATCTAACCATCCGGTCGGAGATCTACCCCGTCTGGTGTACCACGTCTAAAATTGACACGTGAAGGCTGCAACGGTAACTTCTG
TTGTATTCTGCTATTGATCACATAAGTTCGGAGTATGTACTCAAACATCTAAATTGTTAGCTCATACTGAACATCTCTTTGAGAATGAAATATTGTATTC
ATATCTTATTGTATATCAAAATATGCTACAAAGTCTTTTAGATATGAAAAGTAAACAAATAACTTCTATTAGATAAAATATAAATCGGGACTTTATGTGG
ATTCACAATTTGACTGATATAAAGTATAGGTATATTTTTTATTTTATATTTACTTTAAATTGGGTATGAAATGAAAAACTTGGTTAATTGTATAACAATT
AATCTAATGTAATTATTACTCATTCATTGAGTTAAGTTAATTTTAAAAAATTTTTCTTATTTGATTTTTTTTTATTTTATATTTATTAATAGATATTCCT
ATTTTGGTATATTTGGGATTATTGATATTTTTCTTTATAAATTTATTTAATTTATTTTTTCTCATATTTGTTTATAATAATTTTTCTTAATTTATTTTAT
AATTATTGTATATATTTTATTATTTTTCATTTATTAATATTTTTGTTTTTATAAGTATAAATATTATTTACTATGTTATAATTGATAGATTTTTAATTTT
TTATATT
>LE_HBa0208F09_T7_385021 (trimmed for quality and cloning vector)
CTCTCTGATATGCATAAATCTTTTGTTAACCTTACTTATCTATAGTCTACAATGAACAT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.766942
Expected error %
1.05674
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0208F09
Clone
Clone name
hba-208f9
LE_HBa0208F09
P208F09
Clone type
BAC
Contamination
none
Estimated length
94,937
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found