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Clone Read LE_HBa0232G04_T7_383042

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0232G04_T7_383042
Primer
T7
ID from Seq. Facility
LE_HBa_232_G04-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
21 trimmed for vector and quality, 1033 raw
Sequence
>LE_HBa0232G04_T7_383042 (raw untrimmed)
ACGGGGGACTCTAGAGTCGACCTGCAGGCATGGCAAGCTTGAGAATTCTGTATTTGACAACTAAATAACATTGGCGTACATCCTGTGTCTATAGCTGATT
TCTTGCTGTAAAATATGATTATCCAGCTCACACGTTCCACTAGAAAATACTTACCCAGGAAGCTTATAAATGGATGAGCCTGACGCTGCCATAGATGAGG
GAACTTAACTCCACCTTAAATTGCATTGCAGTTCACATGTCCAGCTTATCTCTGTCCGGGAAACCGTGTCTTTGCCTATAAAGCATCTAATGAGATCTGC
TCAACGACAAACTCCCTTAGCCTGCCCCCCTTGGCCGTCGCACAAATATCTCATGTATCGACTCGCTAATCATCTAAATGTACCTCGCTATTCATCCGCG
TTATTATCAACTTCTATTACCGCAGAAGGAAGCCTTAGCGTATTATGGGAACACAATAACAGCCATTGCAAAAATAACTTCCCCGACCCTGACACTCGTT
CTCAATACATGCTGCTCATTCATTAAGACTGTCTGCTCAACGTGGCACGCCATCCCATATGAGCATGAATGATTCTGAGTCGCCATGCGGCTATACAGTC
ACCTTCGTGCTCTAGCGTCATACTATTAGACTCTCCATAAAAATCGGTAACTAGTACAAATGTCCATACCTGACCACGTCTTAATGAAAGATGGCCGAAC
TAAGCCAAGGATTGATTGCGACGAAACACATATTCTCGATTACCCGTTTAGGAAATCAAGTCAGGTATTCTCCGTACCGCGACATTTCATGCTAATATAT
GACCGTAGCTCGTCGGAACTCCACGTGGTACGACCTTACTAGATAAGTGTACGATTCCTTCTGCTCTCGCGGAAGGTTATTAATACGGGGAACCCCAGCG
AGTGACCAGATCTCCACGACTTCATTGCCTTACTGAATTCCGAATGAATTTCACCATGCTGGCAGCAAGTTTTCAAAAGGCAAATAAATCTGGCCCAAAT
TTCCTTGCGGGGTCTTAAAAAGCCCAAAATGTC
>LE_HBa0232G04_T7_383042 (trimmed for quality and cloning vector)
CTGCAGGCATGGCAAGCTTGA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.9397
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0232G04
Clone
Clone name
hba-232g4
LE_HBa0232G04
C07HBa0232G04
P232G04
Clone type
BAC
Contamination
none
Estimated length
91,981
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found