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Clone Read LE_HBa0204F15_SP6_382990

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0204F15_SP6_382990
Primer
SP6
ID from Seq. Facility
LE_HBa_204_F15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
677 trimmed for vector and quality, 994 raw
Sequence
>LE_HBa0204F15_SP6_382990 (raw untrimmed)
GATCTCCACATGTTGTTATGAATGAAACGCAACTACGGGAGTTGAAGCTAACGGGAATTATCATTGAATATGTGAAAGAGTTCACAATCTTTACCCTCCA
AATTCCCCAACTCACGGAAGATGACATGCTGTTCACCTTCATGGACGGGCTGCAAAATTGGGGGAGGACCGAGTTAGAGCGGCGACAAGTAAGAACCATT
GATGAGGCCATCACTCAAACCGAAACCTTGACAGATTTCAAACATGATCGTTTGGACAAGGCGAAGGACAAGGAGGCAAGGGGTAGTCAAGCTAAAGGCG
GGGGAGACCGTGGTCGAGGCAGAGAACAGTCGGCACATCCCAAGCAGCAAGACACGCCCAAACCCGATAGCAGACGGTTTGAACATAAGAAGTACTCGGA
GAAGAGGACGCAGTCCAGCAAAGGAGACGGGGCTATATATATGGCGGACCACACGGTTATGCCAGGTGCCCAGAGATGAAGAGACTTAGTGCCATCCTCC
GTGAGTGGAAGGAAAAGGAGGCACAAGACAAGGCGAAATCGGCAGACACCACTCAGTTGGGCATGGTTGGAATCTGTGGAGCCATAGCCAAACAGGCCGA
CAACCCGAGGGATTTCAGTATGCAATATGTGGATATCTCCATCAACGGGCAACTAGTTTGAGCCAGGGTAGATTCTGGGGCTGAAGCCAACATCATGACC
AAGACGGCGGCAGAGAAATTGGGACTGAAAATTGTTCCCAGTAACAATCGCCCTCAGACGGTCAACGCCCCACCCACTCTCGTGTGTTGAAATACTCATG
GGGTCAGCATCACTTTTAGGACGGTGGAAAGGTTATACGAATTTTTACCGTAGCTCCGTTGGACTTATCCGATGTTTATTCTTGGAAAGGAAATTCTTTT
AGGGGTGCCACACCAAAGAATTGACCCCTACCTTCCAAAAATCATGGGTTGAGGAAAAGGGAAAGGGCTCTGTATGGCGCCCCCCTGGTTAGGG
>LE_HBa0204F15_SP6_382990 (trimmed for quality and cloning vector)
TGAAACGCAACTACGGGAGTTGAAGCTAACGGGAATTATCATTGAATATGTGAAAGAGTTCACAATCTTTACCCTCCAAATTCCCCAACTCACGGAAGAT
GACATGCTGTTCACCTTCATGGACGGGCTGCAAAATTGGGGGAGGACCGAGTTAGAGCGGCGACAAGTAAGAACCATTGATGAGGCCATCACTCAAACCG
AAACCTTGACAGATTTCAAACATGATCGTTTGGACAAGGCGAAGGACAAGGAGGCAAGGGGTAGTCAAGCTAAAGGCGGGGGAGACCGTGGTCGAGGCAG
AGAACAGTCGGCACATCCCAAGCAGCAAGACACGCCCAAACCCGATAGCAGACGGTTTGAACATAAGAAGTACTCGGAGAAGAGGACGCAGTCCAGCAAA
GGAGACGGGGCTATATATATGGCGGACCACACGGTTATGCCAGGTGCCCAGAGATGAAGAGACTTAGTGCCATCCTCCGTGAGTGGAAGGAAAAGGAGGC
ACAAGACAAGGCGAAATCGGCAGACACCACTCAGTTGGGCATGGTTGGAATCTGTGGAGCCATAGCCAAACAGGCCGACAACCCGAGGGATTTCAGTATG
CAATATGTGGATATCTCCATCAACGGGCAACTAGTTTGAGCCAGGGTAGATTCTGGGGCTGAAGCCAACATCATGAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.972223
Expected error %
0.265964
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0204F15
Clone
Clone name
hba-204f15
LE_HBa0204F15
C02HBa0204F15
P204F15
Clone type
BAC
Contamination
none
Estimated length
169,883
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found