Clone Read LE_HBa0204D01_T7_382743

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0204D01_T7_382743
Primer
T7
ID from Seq. Facility
LE_HBa_204_D01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
530 trimmed for vector and quality, 1005 raw
Sequence
>LE_HBa0204D01_T7_382743 (raw untrimmed)
NGTGGGTCGGGGATCTCTGAGTCGACTGCAGGCATGCAAGCTTTATCCCTACTTTGAGTAAGGTACATTTAGTGTTATTTAATAGACCTTTGACAATTTA
CAAAAGTCTTTCAAAAACAAATTTTAAAAAATACATGAGTACTACAAAAGCTATAATCTAAAGCTTAAAAAAAGAAAAATACTCAACAGAAATATATAAT
AAAATAATAAAGCAAAAGAAACGATGCGTAATTAGATCACCTACTTATGTTTTACCTAATTATAAACTTTCATATTCTCTTTTAATTAGAATCATGCCTT
GATGAACTCAAGATATGTTATATCAAATAATTCAAGCGTATAAAAATATTTTTGATTTTCTATTTGAAAGTAACAAATAATATTATTTATTGACGAGAAT
ATGAAAATTGTTGTATTAACAAGAAAAGTTCTTTAGAGCTTAATAGTCACAATATCGATGTTTTAACAATATTAACTAAATAATTTGATATATGATTTTT
GTGAGAACGGTTAGATGAACAGAACGGTCAGATAAGCCTAAGACATTGAGCGTTAAATATTTTAAAAATATACGAATGATAAAGGGATAAGCGTCACATA
ATTATAATTAAGTCATGTAAGTCTCAAAAGAATTTTGCCATTATCCCTAAAATGTATCAATGGTTAAAGCATAAGAGTCACATGTTAGTTTTAAGGGTGT
TTTAACATTATTTTGTACCAGGCAAGCACCCCAAACTGCATTTGAAAATTTTTTTTAACGAAAGAATGAAATTTTTGTTTTAGCTCGTTTAAAAAAAAGT
GATTTTAGGAGGGAATTTATTTGGGCTCAAAATTTTTTATATAGGCCGTAGCCCATTCCAATTTATCCATTAGGGGGGATGTCTTTTAACAGGGAATATT
CGATGTTTCCCTCTCTTTTAAACTTGGGTACAACTCGATTTTAGTAAAACGCCCCTGAAAGAAAAGTTTTTTTTTGGTCTAAATATATGTTTAACATAAA
GTTCG
>LE_HBa0204D01_T7_382743 (trimmed for quality and cloning vector)
GCAGGCATGCAAGCTTTATCCCTACTTTGAGTAAGGTACATTTAGTGTTATTTAATAGACCTTTGACAATTTACAAAAGTCTTTCAAAAACAAATTTTAA
AAAATACATGAGTACTACAAAAGCTATAATCTAAAGCTTAAAAAAAGAAAAATACTCAACAGAAATATATAATAAAATAATAAAGCAAAAGAAACGATGC
GTAATTAGATCACCTACTTATGTTTTACCTAATTATAAACTTTCATATTCTCTTTTAATTAGAATCATGCCTTGATGAACTCAAGATATGTTATATCAAA
TAATTCAAGCGTATAAAAATATTTTTGATTTTCTATTTGAAAGTAACAAATAATATTATTTATTGACGAGAATATGAAAATTGTTGTATTAACAAGAAAA
GTTCTTTAGAGCTTAATAGTCACAATATCGATGTTTTAACAATATTAACTAAATAATTTGATATATGATTTTTGTGAGAACGGTTAGATGAACAGAACGG
TCAGATAAGCCTAAGACATTGAGCGTTAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.889962
Expected error %
0.381404
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0204D01
Clone
Clone name
hba-204d1
LE_HBa0204D01
C02HBa0204D01
P204D01
Clone type
BAC
Contamination
none
Estimated length
139,206
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found