Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0232C16_T7_382706

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0232C16_T7_382706
Primer
T7
ID from Seq. Facility
LE_HBa_232_C16-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
649 trimmed for vector and quality, 978 raw
Sequence
>LE_HBa0232C16_T7_382706 (raw untrimmed)
CGGGGTCTCTAAGTCGACTGCAGGCATGCAAGCTTCCTCGACGTAGAAAGCCCTGACATATCCAATAGCTCACTTACCCCTTCCGCTAGATGAACAAGTA
ATTAACAACAACCATTGCCAATCACTAGTGTTTAAACTTCATGGTTTATGTCATTGCTTTCTTTTTGGTTTTTTGGATGTACATTAGTACATAATGTCTA
TTATTTTAACTGTACATTAACACAGACATTAATAGGATGTTACACACTAACAAGTGAATCATATTTTGGGGGAAATAGTATCTAACCATATACCTCTAGA
TTGCATGAGAGTAGCATCATTGACTCTATCTCTACTTCTTGTTGTAATTTGGACTAGTTTGGAGTTGAAATTTAGAGCTAAAAATGGGAGTTGTACACAA
TATATCAATGTATACATCGATATACTTACAAAGGTTACGAATATTTTACATCCAAAAAACCTTTTGTATTAAACAAAAGGTTCATCCATATGATTTCTTT
TGTAATTAGAGACAAAAATTGAGTCTAAATGGATTATCATTAGCTAAAGACAGAATCAAGGGAGATATTGAAGTTTAAAACTAGCATGAGTAAGAAACAA
AAAGATAAATCAAAGTGAAGTGTATTAAGGATAATTTTCAACAAGTGTTGATAAGGGATAACGAGATGAAGAAGAGATGAAGAGAATATTTTGATCAATT
ACTCACTCGAATCAATAGAATAAACATATATTTAGCAAGATTCCATTAGTTTTGAGACTGAAAAAAAAATCAATTGCCTGTTTCCCTTCAATTTAAAGTT
CCAATTGAAAAAAAAAAGAAAAAGATCCCTTTTTTTTTAATAATATGAAGATTCACTTTATTTTTTTTTTCTCAATTTAAGGAAAATAAAAGTTTTACCC
TTTCCCAGGAATGCCCACTTGGAAGAACCTACCATTTTTTTGTAAAAGGTGGAAAGAATTTTTTCAAATAAAGTTGCC
>LE_HBa0232C16_T7_382706 (trimmed for quality and cloning vector)
CTGCAGGCATGCAAGCTTCCTCGACGTAGAAAGCCCTGACATATCCAATAGCTCACTTACCCCTTCCGCTAGATGAACAAGTAATTAACAACAACCATTG
CCAATCACTAGTGTTTAAACTTCATGGTTTATGTCATTGCTTTCTTTTTGGTTTTTTGGATGTACATTAGTACATAATGTCTATTATTTTAACTGTACAT
TAACACAGACATTAATAGGATGTTACACACTAACAAGTGAATCATATTTTGGGGGAAATAGTATCTAACCATATACCTCTAGATTGCATGAGAGTAGCAT
CATTGACTCTATCTCTACTTCTTGTTGTAATTTGGACTAGTTTGGAGTTGAAATTTAGAGCTAAAAATGGGAGTTGTACACAATATATCAATGTATACAT
CGATATACTTACAAAGGTTACGAATATTTTACATCCAAAAAACCTTTTGTATTAAACAAAAGGTTCATCCATATGATTTCTTTTGTAATTAGAGACAAAA
ATTGAGTCTAAATGGATTATCATTAGCTAAAGACAGAATCAAGGGAGATATTGAAGTTTAAAACTAGCATGAGTAAGAAACAAAAAGATAAATCAAAGTG
AAGTGTATTAAGGATAATTTTCAACAAGTGTTGATAAGGGATAACGAGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.943517
Expected error %
0.0323479
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0232C16
Clone
Clone name
hba-232c16
LE_HBa0232C16
P232C16
Clone type
BAC
Contamination
none
Estimated length
70,830
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found