Clone Read LE_HBa0232B20_T7_382626

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0232B20_T7_382626
Primer
T7
ID from Seq. Facility
LE_HBa_232_B20-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 1008 raw
Sequence
>LE_HBa0232B20_T7_382626 (raw untrimmed)
ACTGATACGGGGTATCTCNTANANTCGACCGGNCAGGGCATGGCAAGCTTGACATCGATTCCCAAATCTATGAAATTATGGCAACTATTTATAAACTAAA
CAAGATTGTGAACAATATCCGATAGTTTAAACTATGATGTTTTTTCCACACCAAAAATCTATATCGCCAGATACTGTAAATCTGTGGGGTCACTAATATG
CACGGATTAACCTATTTGCGGACCTTCAAAACTACATGTTAAGTCTTAACTCTCCTAAATAAAATACATGTAATGACTATTCAAAAACATCGAATAGATA
ATAACCTATCTCAATATATTAAAACTAAATCCATATAACTTGAACTACTGAACCAATGGTTACCCCCAGTGGCGACCCCATAACAATACAACTCCCTTTC
CCACTAATACCACCAAAG
TGACCCCAATTATTTACCTTACATTCATCAATCACAACCATTATAATTTAAAAAAAAACAATGTAACAACCAGCTCCACCCA
CCACAAAAGGACAAACCAAATTATCAGCTACTACACTTTTTTTATTTATTTACTACCATATGTAATCCTTCCAAGTGACTAGATACTTACTTTTATCAAT
TTATAAACCCTCTAATCATTGTCTGTATTATAGAGATTCTCAGTTACCACTTGAAGTGATAAAGTGCCCCTCCCAAATCTCCAGAAACGAAACCGACATA
CAGCTGTCAACTACTCTACTCAAACTTCATATCCAACCCACGATCCAATAAGCCGTAACACTAATAACTAGGGGGAAACATACAATCATCACTCATTCTT
ATAAAGAATCATTAAAATATTTTAACCGGATCGCACCGGGCATATTAACGACTTGGGCCCCCCGGGTTTCCCCTTCCCCCCCGGCCGGTAAGTTTCCTAA
CCCCTTTTTTCCCCCAATTTCCTAGATACAAAAAAAACAATTTCTAGGGAATGGAAAACGTGTTTTTAAACCCCCCCCCAAACTCCGAGTTTTAAAAATA
GCCATGGG
>LE_HBa0232B20_T7_382626 (trimmed for quality and cloning vector)
TGACCC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.608931
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0232B20
Clone
Clone name
hba-232b20
LE_HBa0232B20
P232B20
Clone type
BAC
Contamination
none
Estimated length
118,865
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found