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Clone Read LE_HBa0204B06_SP6_382568

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0204B06_SP6_382568
Primer
SP6
ID from Seq. Facility
LE_HBa_204_B06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
692 trimmed for vector and quality, 941 raw
Sequence
>LE_HBa0204B06_SP6_382568 (raw untrimmed)
NGAGTTATTGAATGACGATTTCCTTCTCACCACGCTTAGCATAATGAACATTAATTGCAACAAACCTTTTATGCCTATGCTACGCAAAAACAGAAAGACT
AAATGCCATATAACTTCTTTTTAACTCACATAGTTCTATTATAAGACATATGATTGGGGACTTACCACACCAAATCCACTAAAACACTTAAACTTAGAGT
TTCTTAAACATAAATCAGACTTAGGAAGAGTATATCTAACCTCGTAGATAACATCTTGTTGTCCTTAAGATTTGAAATTAATGACGCCCAACTTAACTAC
AAAGGGACTTGCCACTTTGCCATCAACTTCTATACGTACCCCTTCGGCCTTAACACTGTCTCCTATGGGAGTATTAACTAGAAACAGTTCATGTAAGATC
TCAAGTGGCAAGTCAAATTGATTAGCAAAAAAAGGAGTAAACACAGACAAAGTAGATCCTTAATCTAATAATGCATAAACAAACAAAAAAAAAGACAATA
AATTTCCATTATCCACATATGTGTACTTCTCTTGTTCCTCTATTCCTCTCAACGCATAGAAACGGTTTCTCTTTGGGGGGGAGGGGGTTCGGCTACAACA
TCTGACCGAGGCTGAGCATCTGCCTTGACCTGTTTGATTTGAGCCACGCGATTATAATTTTAACCCAAATTATTTGGAAACAGAAGCCTTACTACCCTAT
TTCTATAGTTTATTATAGCATAACACTTATGAAGCAAATCCATGTCTTAGCCATATTCTTGAGTTGATATGCAACCAACTTAACCTTATCCTCCTCATTA
TACTCATATCATACTTTCAAACTTTACCATGCAATCCACTTCAAGCGAACTACAACACTCACCACACGTCTTTTGCCACGTTTGGGCAATTCAATTAGGG
CCCCTTTTTTGGGAAGGGTAGATCTTTATTCCGGGGGCCTG
>LE_HBa0204B06_SP6_382568 (trimmed for quality and cloning vector)
GCATAATGAACATTAATTGCAACAAACCTTTTATGCCTATGCTACGCAAAAACAGAAAGACTAAATGCCATATAACTTCTTTTTAACTCACATAGTTCTA
TTATAAGACATATGATTGGGGACTTACCACACCAAATCCACTAAAACACTTAAACTTAGAGTTTCTTAAACATAAATCAGACTTAGGAAGAGTATATCTA
ACCTCGTAGATAACATCTTGTTGTCCTTAAGATTTGAAATTAATGACGCCCAACTTAACTACAAAGGGACTTGCCACTTTGCCATCAACTTCTATACGTA
CCCCTTCGGCCTTAACACTGTCTCCTATGGGAGTATTAACTAGAAACAGTTCATGTAAGATCTCAAGTGGCAAGTCAAATTGATTAGCAAAAAAAGGAGT
AAACACAGACAAAGTAGATCCTTAATCTAATAATGCATAAACAAACAAAAAAAAAGACAATAAATTTCCATTATCCACATATGTGTACTTCTCTTGTTCC
TCTATTCCTCTCAACGCATAGAAACGGTTTCTCTTTGGGGGGGAGGGGGTTCGGCTACAACATCTGACCGAGGCTGAGCATCTGCCTTGACCTGTTTGAT
TTGAGCCACGCGATTATAATTTTAACCCAAATTATTTGGAAACAGAAGCCTTACTACCCTATTTCTATAGTTTATTATAGCATAACACTTAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.962433
Expected error %
0.377158
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0204B06
Clone
Clone name
hba-204b6
LE_HBa0204B06
C08HBa0204B06
P204B06
Clone type
BAC
Contamination
none
Estimated length
37,944
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found