Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0245M14_T7_381138

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0245M14_T7_381138
Primer
T7
ID from Seq. Facility
LE_HBa_245_M14-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
335 trimmed for vector and quality, 882 raw
Sequence
>LE_HBa0245M14_T7_381138 (raw untrimmed)
CTATGTCGGGGTCTCTGAGTCGACGCAGGCATGCAAGCTTAAGCTCGATTTCTCATAATCTATTAGGGATGATTTNTTTNNAGTGTTGNAGGAGTGTCTG
CTTATAGAGGGNATATGAATGGGGAGGAGANTAAAGAGAAAAATTGTTNATGAANAAANGAAAAGANATAAATACCCTATGAGATGATTGAATNNANATT
AAATNGAAGAAGAGANAATAGGGNTGAGATATGGTTGTGTATAAGAAAGGATGTTANGGGAGAAGTTATAAANTTGTNTAGNTTTAGATTTTGTTNTNTG
NATAGAAGTANTTTTTGTTGTAATATTAAAATTANNNTTGAAATNAATAAGTTATNTGTTTAAATTAANATTNANTGTTAGTANAAGGANTGAAATNATT
TTTTTTAATTAATTAAAGGTTAAGTATGATTAGTGAAATTTNATAGGGANGAAAATTAATATAAGAAAGAGGGANGAAAANAATTATTTTNTNTTTTTGA
TATATTTGNTNTTTTAATNNAANTTTGGNTANATATTTTNNNTTGTANGGTTAANTTATNATGTNANAATTTNTATTAGTNTATGTGGNGNTTANAAGGG
TNNATGTGTATATANTAAAAAAAAGTTATTTTNTATTTTGTATTATATATGAATGATGTTTAAATTTTTTTAAAGAATAATTAAAATTTATATTTTAAAA
GTAATTATTTTGNAAGTGATTTTTTATGAGAAATAAATTTTTAAAAAAATAATTTAAGTTAAAAAATGGTTAAAAAGTGAAGAAAGTTTAGAAAGTTTTT
TTGATTTGTAGTGGGAATAATAATGAAAATTTTTTTTGTTTATAAATGANAATTTAAGTTTTTTTGAAAAATAAATTTATGT
>LE_HBa0245M14_T7_381138 (trimmed for quality and cloning vector)
TATGAATGGGGAGGAGANTAAAGAGAAAAATTGTTNATGAANAAANGAAAAGANATAAATACCCTATGAGATGATTGAATNNANATTAAATNGAAGAAGA
GANAATAGGGNTGAGATATGGTTGTGTATAAGAAAGGATGTTANGGGAGAAGTTATAAANTTGTNTAGNTTTAGATTTTGTTNTNTGNATAGAAGTANTT
TTTGTTGTAATATTAAAATTANNNTTGAAATNAATAAGTTATNTGTTTAAATTAANATTNANTGTTAGTANAAGGANTGAAATNATTTTTTTTAATTAAT
TAAAGGTTAAGTATGATTAGTGAAATTTNATAGGG

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for contaminants
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.91118
Expected error %
18.2963
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0245M14
Clone
Clone name
hba-245m14
LE_HBa0245M14
C12HBa0245M14
P245M14
Clone type
BAC
Contamination
none
Estimated length
53,759
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found