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Clone Read LE_HBa0245A24_T7_379989

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0245A24_T7_379989
Primer
T7
ID from Seq. Facility
LE_HBa_245_A24-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
113 trimmed for vector and quality, 737 raw
Sequence
>LE_HBa0245A24_T7_379989 (raw untrimmed)
TTCTTTTAGGAGAGCCTTGTCCTCATACTCATCTTCAATATGAGCTACCCCTCATTTTTTCGATACAAAGAGGTTAATCTCATTTGAGGAGGTACTTTGT
ATTGGTATGATGGCATTGCATTTGAATGATGTAGGATGGGACAAATATGGTTAGAGTTATAGATTACAGCTTACATGTTATTGTATCGATTTCACTTTAA
AGGTATATCTAAAATCAAATGTTTGAAAATGGTTTGGTTAGGGAGGCCAGGCTTGCGAGTGTGCAATTAAATGCATGGTTGGCAAATGTGAGGGATACCT
TTTTTTATAGGGTCACTCTGAAGTTCTCCTTTAATACATTGAGTTCATGAACACAACACTGTATGATAAGCCACTACAATATGCATCTCTAGCTTGCATG
GGCAATTGCGATGGATTTCACCATTATTCCTAAGAACACTGTATAGTGCGTGATTTTCCTCTTACACGGGTTTTCATACTTTCATTAACTATTGTTCCTT
AACTTAGTTTTATTTACCTTTTCTTATTCTCTTCACTTTTACTCATACGCTTTCTCTTCGAGCGTTATTCTATCTTATAAATCTTAACTCACATTAAATC
TTTTTTTTTTTATATTATCATATTTTTTTTTTACTACCGATTCCTCTTACTCCCTTTTTCATGCTTTTTTACATTTTAATAGTTCCTTTTTCCCTCCTCT
CCCTTACCTCTCGCTTTTACTACCATCTTCTTCATCT
>LE_HBa0245A24_T7_379989 (trimmed for quality and cloning vector)
TGTCCTCATACTCATCTTCAATATGAGCTACCCCTCATTTTTTCGATACAAAGAGGTTAATCTCATTTGAGGAGGTACTTTGTATTGGTATGATGGCATT
GCATTTGAATGAT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.901952
Expected error %
0.903347
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0245A24
Clone
Clone name
hba-245a24
LE_HBa0245A24
P245A24
Clone type
BAC
Contamination
none
Estimated length
66,836
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found