Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0244P17_SP6_379860

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0244P17_SP6_379860
Primer
SP6
ID from Seq. Facility
LE_HBa_244_P17-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
631 trimmed for vector and quality, 880 raw
Sequence
>LE_HBa0244P17_SP6_379860 (raw untrimmed)
NNNCCAATAGTTTAGGCGGTGGAGCTGCGGCTGTGGAGCACCATAAGGTGGTGGATTTTGAGTATCCCTGGCATTGCAGGCTGATGAGGGGGTTGGTAAG
TAGAAGCCTTTAGGTCGAACAGCGTTGGGGATATTCGCGGGGTCTGCTGGCGGTTGGGGATTGGATCTTGGAACCTGATGAGACTGAGCAGCAGAAGGAT
AAGTATAGCCATTTGAACCTTTATTCTCCTGAAAACTAAGACCTGACATTTGTCTCTGCACATCATCCATCATTTCCCGGCACTGCATGTTTCTTGTCAT
CACAAAATCACTGCCCTGTTGCTTTACATTTGTGATCGCGTCCTGTTTAACCCATGAAAGGAGAACATCAGTTCGTCATTCTTCAGTCGAAGGGCAGAGG
AATGTGAATCCCAGCACACACACACACACACACCCTTTCTCAAACAGATGAATAATTCCATACCTGAAGTGTAACATAGAACTTCAATCCCTCGTTGATA
TTCTCCTTTATCTCTTGATATTTTGAAATGGCAGCTTCGATTTGCTTATAGGTTCGCTCACGAGATGCTGTAACATTGAGCGAATAAAAGTTAACTAATA
CTGCTGGAAATAGAAATCAACATTGGACAAAAATTAACAGCTAGAGCAACATTTCAGAGTAAGCAAATCAAATAGTTTTATTTGGGCTGAACATGGTTCA
TTGTTCCTTTGATATTGATTGCTGCAAATGGAAACCGCAAGCTTCTACTCTTCCTAATTCATTAACAATATTATCTGAGGTCTTTTGTCTTCATTCCATA
GCCCCCTGGTGTCCCTGGCCTTCTGAAAGGATACCACAAGGAAACTCCCCTCTTCCCGGTAAAAATCCGTTTTGACCTCA
>LE_HBa0244P17_SP6_379860 (trimmed for quality and cloning vector)
GCTGCGGCTGTGGAGCACCATAAGGTGGTGGATTTTGAGTATCCCTGGCATTGCAGGCTGATGAGGGGGTTGGTAAGTAGAAGCCTTTAGGTCGAACAGC
GTTGGGGATATTCGCGGGGTCTGCTGGCGGTTGGGGATTGGATCTTGGAACCTGATGAGACTGAGCAGCAGAAGGATAAGTATAGCCATTTGAACCTTTA
TTCTCCTGAAAACTAAGACCTGACATTTGTCTCTGCACATCATCCATCATTTCCCGGCACTGCATGTTTCTTGTCATCACAAAATCACTGCCCTGTTGCT
TTACATTTGTGATCGCGTCCTGTTTAACCCATGAAAGGAGAACATCAGTTCGTCATTCTTCAGTCGAAGGGCAGAGGAATGTGAATCCCAGCACACACAC
ACACACACACCCTTTCTCAAACAGATGAATAATTCCATACCTGAAGTGTAACATAGAACTTCAATCCCTCGTTGATATTCTCCTTTATCTCTTGATATTT
TGAAATGGCAGCTTCGATTTGCTTATAGGTTCGCTCACGAGATGCTGTAACATTGAGCGAATAAAAGTTAACTAATACTGCTGGAAATAGAAATCAACAT
TGGACAAAAATTAACAGCTAGAGCAACATTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.981265
Expected error %
0.397613
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0244P17
Clone
Clone name
hba-244p17
LE_HBa0244P17
C05HBa0244P17
P244P17
Clone type
BAC
Contamination
none
Estimated length
125,140
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found