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Clone Read LE_HBa0243P17_SP6_378596

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0243P17_SP6_378596
Primer
SP6
ID from Seq. Facility
LE_HBa_243_P17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
749 trimmed for vector and quality, 975 raw
Sequence
>LE_HBa0243P17_SP6_378596 (raw untrimmed)
ATTACTGGTTGAGAATTGACGCCGCAACAAGTTTCTACGATGACCTTTGTTTTCTTCTTCTTCTTTTTTAGAGAATATTTATTACCCTAATTATTATACT
TATCTATTTATAAAAATTATAAAAGTGATCCACTATTAATTATAAAGTTATCTTTTCTTTAACCACAAACTAAATAATTTATTAAAATTATCCCACTAAT
TTCATAATTATAATTATGAATAGTCCAAAACACCCATTAGAATCTATCAAAAAGTATTTTCTGACATAAAAAAGTTCAAGTGCTCAAAACGATCGAAAAT
GATCGTTACAATAGATACCAATTTACCTGTCGTTCGTCCTCGAACGATCATAGGAAGAAAGGCGAAGAAGAGAAAGAGTACCTGAATCTGTAAAAAGATG
TGGATATCTTTCTTGCATATCAACCTCACTCTCCCAAGTGGACTCTTTAACTTGCAAGTCTTCCACTGAAACTTGATAGATTTAATCACCTTTGATCTCA
ACTTGCGGACCTCCCTATCTAGGATAGCAACAGGCTCATCCTCATAAGACAGATTCTCATCAAGAAGAATTGAATCCCAACGAATAATGCAATTTCCATC
ACCATGGTATTTTTTCAGCATAGACACATGAAATACTGGGTGCACTCCTGACAACCCTGAAGGCAATGCCAATTTATAAGTCACCTCCCCCACGCGCTTC
AAAACTTCAAATGGACCAATATACCTTGGACTAAGCTTACCTTACTTACCAAAGCGTATCACACCTTTCATGGGTGAAACCTTCAGTAAGACTTGTTCAC
CCTCCATAAAATCCAAGTCCCTAACCTTTCGAATCTTCAATTCCCTTCGGTCTATCCTGAGCTGCTAAAAGCTTTTCTTGAATAAATTTCACTTTTTCTA
ACGATCCCCTCAAAAAATCGGTACCCCAGGTTCTACCTCAAATGGATCAAACCAACTTAAGGGGAAACCTGCTTC
>LE_HBa0243P17_SP6_378596 (trimmed for quality and cloning vector)
AATTGACGCCGCAACAAGTTTCTACGATGACCTTTGTTTTCTTCTTCTTCTTTTTTAGAGAATATTTATTACCCTAATTATTATACTTATCTATTTATAA
AAATTATAAAAGTGATCCACTATTAATTATAAAGTTATCTTTTCTTTAACCACAAACTAAATAATTTATTAAAATTATCCCACTAATTTCATAATTATAA
TTATGAATAGTCCAAAACACCCATTAGAATCTATCAAAAAGTATTTTCTGACATAAAAAAGTTCAAGTGCTCAAAACGATCGAAAATGATCGTTACAATA
GATACCAATTTACCTGTCGTTCGTCCTCGAACGATCATAGGAAGAAAGGCGAAGAAGAGAAAGAGTACCTGAATCTGTAAAAAGATGTGGATATCTTTCT
TGCATATCAACCTCACTCTCCCAAGTGGACTCTTTAACTTGCAAGTCTTCCACTGAAACTTGATAGATTTAATCACCTTTGATCTCAACTTGCGGACCTC
CCTATCTAGGATAGCAACAGGCTCATCCTCATAAGACAGATTCTCATCAAGAAGAATTGAATCCCAACGAATAATGCAATTTCCATCACCATGGTATTTT
TTCAGCATAGACACATGAAATACTGGGTGCACTCCTGACAACCCTGAAGGCAATGCCAATTTATAAGTCACCTCCCCCACGCGCTTCAAAACTTCAAATG
GACCAATATACCTTGGACTAAGCTTACCTTACTTACCAAAGCGTATCAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.944826
Expected error %
0.135503
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0243P17
Clone
Clone name
hba-243p17
LE_HBa0243P17
P243P17
Clone type
BAC
Contamination
none
Estimated length
98,189
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found