Clone Read LE_HBa0240P16_SP6_377835

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0240P16_SP6_377835
Primer
SP6
ID from Seq. Facility
LE_HBa_240_P16-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
615 trimmed for vector and quality, 891 raw
Sequence
>LE_HBa0240P16_SP6_377835 (raw untrimmed)
CATCCTCATGAACCTTTTTAAGGGGGATCAACATTATGCTTTGATGGACAAGTTGCTTATTAGGGACCTCACCTCCAACTTGAGGGAGTGTTGAGATTAA
TAAGTTTATGCATAATTATTTAGTTGTCTTAAACAGTGTTAGTTTCAAAAAGTTAGTTAGTTAACCGTAAAGTTAGTTAGTTAACAACTTTTGTAGTTAG
TTAACTTTCCATTAGTCAGCTGTTATAGATTATTAAAGCTCAATTTTCATACTGTATATATATATGTCTCTCATTGTATGTAGTTCTTCTTCGATTTTCA
TATTTTTATAAATGAGAAATGTGTCTTCTCAATTGGTTCTCTTTCAACTCTGTTCTAGAATCCACCATTAATGGTGGTTCACTGCTTTTGCTCTAAGTTT
TGATATGTTTTTTATAATAATATTTGAATACTCATTCTTCACCCGTATTTTTATGATTAGTATAGATTAAATTTTTAGATTTGATAGATAATAACAAACA
TATTACTTCCACTTGGTTTTTTGTTATTATTTTTTCAATTATTCATTTAATTATTTTTAAATAAAAACATATATAGATGATTTTACATTTCAATATTTTT
GTGGTTAAATTTAATCATCTTTACTTACAAATGTATATTGTTGTTTATCTCCCTTTTTAGGTTATTTCATATGATGAGGATATAGCATGGGCTTAATTTT
TTTTTTAAAAAAAAAGAAAAGAATTAATATAGTCAGTTTCTACTTTGTTTGTGATCGCACTCATGATTGGTGATTATGGCTACTTGATTTAAAAGGCTTT
CCCCCTTTAGATTTTATACCCTTAATTATTAGCCGTGACATGACTTAATAACTTTTTTATTATAATGACTAGTATGTCTATGTTAGGTTAA
>LE_HBa0240P16_SP6_377835 (trimmed for quality and cloning vector)
GGGATCAACATTATGCTTTGATGGACAAGTTGCTTATTAGGGACCTCACCTCCAACTTGAGGGAGTGTTGAGATTAATAAGTTTATGCATAATTATTTAG
TTGTCTTAAACAGTGTTAGTTTCAAAAAGTTAGTTAGTTAACCGTAAAGTTAGTTAGTTAACAACTTTTGTAGTTAGTTAACTTTCCATTAGTCAGCTGT
TATAGATTATTAAAGCTCAATTTTCATACTGTATATATATATGTCTCTCATTGTATGTAGTTCTTCTTCGATTTTCATATTTTTATAAATGAGAAATGTG
TCTTCTCAATTGGTTCTCTTTCAACTCTGTTCTAGAATCCACCATTAATGGTGGTTCACTGCTTTTGCTCTAAGTTTTGATATGTTTTTTATAATAATAT
TTGAATACTCATTCTTCACCCGTATTTTTATGATTAGTATAGATTAAATTTTTAGATTTGATAGATAATAACAAACATATTACTTCCACTTGGTTTTTTG
TTATTATTTTTTCAATTATTCATTTAATTATTTTTAAATAAAAACATATATAGATGATTTTACATTTCAATATTTTTGTGGTTAAATTTAATCATCTTTA
CTTACAAATGTATAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.894721
Expected error %
0.62991
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0240P16
Clone
Clone name
hba-240p16
LE_HBa0240P16
P240P16
Clone type
BAC
Contamination
none
Estimated length
90,848
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found