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Clone Read LE_HBa0240I20_SP6_377671

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0240I20_SP6_377671
Primer
SP6
ID from Seq. Facility
LE_HBa_240_I20-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
540 trimmed for vector and quality, 976 raw
Sequence
>LE_HBa0240I20_SP6_377671 (raw untrimmed)
AGTTTAAGCCTAGATATGTTCATATCTCCAAGTAACATCGCCCTTTTGCGCTCAATTTTCACCAAATCTGACACTCCCTACACCTTTTTAGGGATCTGAG
CCCTGGAGTCAACAATCATGTGAGGAGCATACCTGGAGAGTTGATTAAACTTGAGTCCATACTCTTGGACTGTCATGTTACCTTGCCTTAAGTTCATGAA
TTCTTGGGCTTGTTCTTCTCTCAACTTTATTGGGAAAAACCTGTCGAGAAAATTCTCACTAAAGCAGTCCCAAGTGATAGGAGCAGCATTTGCACCCCCA
TTCTCCTTCCACTGAGTGTACCAGATATGAGCAACATCCTTCAACATGTATGATGCTAACTCAACCCGATCAATCCCAATGACTTTCATTTCCTCAAAGA
TCTTCTTGATCTCATCCAAGAAATTCTGATGATCCTCATTAGTCTGTGATCCTTAGAACTCATGCGGATTCCACCTAACAAAGTCACAGACCCTTGCTGC
TACTGATTCACCATTTTCATTCAGATGAGCATGAACCCGATTCCTTTGGTTAGTCATACTCTAAGACAACATTTGTATGATATTTCTGAACTCAACATTG
GAGACTTCTTGATCTGGGGCTGGAATCACTGCGTTTGCATTTCTGGTCTTCACATTTCTAGCGTAACTTCTACCAAGATGGATTATATGAAACGTTAAAT
GTCATGTTATAATAAAATATAATTTAACCTCCCTCTTGATTTTAGTAACTAGCTAACGTAATTCTTAAAATATCTATTAAATTTTATTATTATTACTGGT
GACAAATCCTTATTTTAATTTATCTTAATACTTTATATAAATTTAATTTTTGTTGTTAATGAACTCTTTACCTGTTTGCCCTTTAGATAATTATCTCTCT
CTCTTTATATTATATCATTTTATAAATTGAACATTCTCTTCTTTTGCCTTTTTGAATTGTTAAATTCCATTCCTTG
>LE_HBa0240I20_SP6_377671 (trimmed for quality and cloning vector)
AGCCTAGATATGTTCATATCTCCAAGTAACATCGCCCTTTTGCGCTCAATTTTCACCAAATCTGACACTCCCTACACCTTTTTAGGGATCTGAGCCCTGG
AGTCAACAATCATGTGAGGAGCATACCTGGAGAGTTGATTAAACTTGAGTCCATACTCTTGGACTGTCATGTTACCTTGCCTTAAGTTCATGAATTCTTG
GGCTTGTTCTTCTCTCAACTTTATTGGGAAAAACCTGTCGAGAAAATTCTCACTAAAGCAGTCCCAAGTGATAGGAGCAGCATTTGCACCCCCATTCTCC
TTCCACTGAGTGTACCAGATATGAGCAACATCCTTCAACATGTATGATGCTAACTCAACCCGATCAATCCCAATGACTTTCATTTCCTCAAAGATCTTCT
TGATCTCATCCAAGAAATTCTGATGATCCTCATTAGTCTGTGATCCTTAGAACTCATGCGGATTCCACCTAACAAAGTCACAGACCCTTGCTGCTACTGA
TTCACCATTTTCATTCAGATGAGCATGAACCCGATTCCTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957208
Expected error %
0.657112
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0240I20
Clone
Clone name
hba-240i20
LE_HBa0240I20
P240I20
Clone type
BAC
Contamination
none
Estimated length
100,402
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found