Clone Read LE_HBa0224P23_SP6_377456

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0224P23_SP6_377456
Primer
SP6
ID from Seq. Facility
LE_HBa_224_P23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
7 trimmed for vector and quality, 808 raw
Sequence
>LE_HBa0224P23_SP6_377456 (raw untrimmed)
ACCGTCTCTCACATCGGCATGAGATTCCTCCCTTTCGGGGTTGTGTTGAGTCTATATGAGATGACTCGCCCTTTGAGAGATCATAAAGGATTGAATCTGG
CCCAATCTAAGCTGACTCACGTATTTAAACCACACTGAAGAGACATATACGTCTACGCCCATATAGTGCCTCACAAAGGGCCCTCTTACTGCTGGAATGG
TAGATATTGCTATAGGCGAACTCAACAAGAACGAGGTGATTAGCCCAAATACCATTGAATTTGATGACACATCATATCAATAAATACTCGAGGGTGCGAA
TGGAACGTGCTGCTTGACACTACATCTGCTGATGAAATGTTGTGACTGGACTCGCTGGATTAACAATATTCTTCTGAAATGACTTCCAACAATGAGAGGT
TGGCCAAGAACCACGATCTGATATGATAGACGAATAATCCCCATGCAAACACTCGATTTCTTTAATGCAAAGCTTGTAATAATCATACGACGAATATGTA
CTACTGACCGCACAAAAACTGAGAATACATAATCACTATGTACACTATCACCCAGATGGAATCTCGACGTGTGCAAGTATGAGGTGATACCATGATTACC
TCCATGTTGATGACTTTCCCCTTCCGCGTGGGAGTGTCCATATCATGAGGCATACTCCCTGAGAGCCGATCCTCAACCGTTAATTTCCAGCAATTGCGGG
TCTTACTTCACGAAAAATTCAAGATACCCACTTCTTGGCCGTTCTCCCATGTCACTTCATTGGAAAGCCCTAAAATAAATTCATGTCCCCTTAAATGTAA
AAAACACC
>LE_HBa0224P23_SP6_377456 (trimmed for quality and cloning vector)
GATTGAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.359988
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0224P23
Clone
Clone name
hba-224p23
LE_HBa0224P23
C03HBa0224P23
P224P23
Clone type
BAC
Contamination
none
Estimated length
164,042
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found