Clone Read LE_HBa0113J24_T7_37727

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0113J24_T7_37727
Primer
T7
ID from Seq. Facility
LE_HBa_113_J24-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
703 trimmed for vector and quality, 750 raw
Genbank Accession
DU086084
Sequence
>LE_HBa0113J24_T7_37727 (raw untrimmed)
GCTGGGACCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTAAGGCAAAACTCATCTAATTCATTCAACCCAGTTAATCATTGTTCTGCAG
CTTCGCTCCAATCCATTTTCAACTTCTTCATAGACCACATGGATTTATTCTCTAATTCAACCAGAAGATAACAAGCTTTCCCATATACAAGTTGGTATGG
GGACATTCCTATGAGAGTCTTATGCGATGTCCGATAGACCCAAAGAGCATCATCAAACCTTCTTGACCAATCCGTTCTACTAGCATTCACTGTTTTTATA
AATATTTGTTTGATCTCCCGATTTGACACTTCAACATTCCCACTAGTTTGAGGGTGGTAAGAAGTGGGAAATTACGACGAACCCCATATTTTTCCAATAA
CTGCTTGAACAATCTTTTTTGCAGAATTGGGAGCCCCATTCACTAATAATAGCCCTTGGGGTGCCAAAACGAGAGAATATATTGTTTTTTAACAACTTAG
TGACGCTCTTCCCATCATTGTTTGCGAGGAAGATAGTTTCCTCTCATTTAGATACATAATCAACCGGTACTACAATATACTTCATTCAATGAGAACTCAC
AGAAAGGCCCATAAAGTCAATACCCCAAACATCAAATAACTCAATCTCTAGAATGGGGTTTAGAGGGAGCTCTTTCTTTCTTGAAATGCCGCCATCTCGT
TGGAATCAATGACATGCTTTAGTCCAATCATGAGCATCTTGATGAAGAGT
>LE_HBa0113J24_T7_37727 (trimmed for quality and cloning vector)
AGCTTTAAGGCAAAACTCATCTAATTCATTCAACCCAGTTAATCATTGTTCTGCAGCTTCGCTCCAATCCATTTTCAACTTCTTCATAGACCACATGGAT
TTATTCTCTAATTCAACCAGAAGATAACAAGCTTTCCCATATACAAGTTGGTATGGGGACATTCCTATGAGAGTCTTATGCGATGTCCGATAGACCCAAA
GAGCATCATCAAACCTTCTTGACCAATCCGTTCTACTAGCATTCACTGTTTTTATAAATATTTGTTTGATCTCCCGATTTGACACTTCAACATTCCCACT
AGTTTGAGGGTGGTAAGAAGTGGGAAATTACGACGAACCCCATATTTTTCCAATAACTGCTTGAACAATCTTTTTTGCAGAATTGGGAGCCCCATTCACT
AATAATAGCCCTTGGGGTGCCAAAACGAGAGAATATATTGTTTTTTAACAACTTAGTGACGCTCTTCCCATCATTGTTTGCGAGGAAGATAGTTTCCTCT
CATTTAGATACATAATCAACCGGTACTACAATATACTTCATTCAATGAGAACTCACAGAAAGGCCCATAAAGTCAATACCCCAAACATCAAATAACTCAA
TCTCTAGAATGGGGTTTAGAGGGAGCTCTTTCTTTCTTGAAATGCCGCCATCTCGTTGGAATCAATGACATGCTTTAGTCCAATCATGAGCATCTTGATG
AAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.961441
Expected error %
0.104426
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
dbj|BAB02143.1| Score 131 E Value 2e-29 Identity 47.80% Align. Length 591bp (84.07%) Frame 2
retroelement pol polyprotein-like [Arabidopsis thaliana]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAF24531.1| Score 128 E Value 2e-28 Identity 43.20% Align. Length 702bp (99.86%) Frame 2
F7F22.17 [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0113J24
Clone
Clone name
hba-113j24
LE_HBa0113J24
P113J24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found