Clone Read LE_HBa0224G23_SP6_377024

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0224G23_SP6_377024
Primer
SP6
ID from Seq. Facility
LE_HBa_224_G23-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
604 trimmed for vector and quality, 861 raw
Sequence
>LE_HBa0224G23_SP6_377024 (raw untrimmed)
GGGGTTCGTATTCTGTTTTATGGAGTTTGGAAAAGAGCGTTTCTTGAGAGAATTAAATTTCATTTTGACCTGTATTGAGACATGTAAAAGTGGTATAAAA
CCGACCTAATCTTAATGGATGGACGTCCAAAGAATTACCCGAAAAGACCCTCCACTTAAATTACCTAAAACGTCCCTCCTAAATTGACTACAACTAGGAT
AACATTTGACTTAGGGTCTCGAGTTTTTAACGGAGTTTGGAAAGAAGAGCGTTTCTTGAGAGAATTAAATTTCATTTTGATCTGATTTTAGACATGTAAA
AGTGGTATAAAACTGACCTAATGTCAATATATGGACGTCTAAAGAATCACCCGAAAAGACCTTCCACTTAAATTACCTAAAACGGCCCTCCTAAATTGAC
TACAACTAGGAGAACATTTGACTTAGGGTCTCGAGTTTTGACAAGGATTTAAATTAATTAATTCAGTTGTTAATTTAATTAATTAAGTGATCTAGGATAA
TTACTAAAGTACCCCTAAGTCGTTAGGACCATAACCAACCCCTTTAGACCATCCTAGGTTAGGTACTAGGACAATTCTTTAGTTAGTTACTCGTCTAGTG
TCACCCGGTTATGTCTTAGGCTGTTGGGTGCACTTGTTAGTTTATTTTTGTTTGTCCTAAGTTATTTATATAGTTAGGTAAGTTAGTTAGGATTTAGGAA
TGGTTAGGAATCTTGGAACCATATGACTTGGACTGCTAATCTCTCGCCTCCTAACTACTCTAATTGAATTTAGTTTGGGGTTGGTATTCTTGTTCCAACG
AGAGTAACTATATACTTCTTTGCATATGTGTTTGTATTCAACCTTTATTCATTCTGTCCTA
>LE_HBa0224G23_SP6_377024 (trimmed for quality and cloning vector)
GGAAAAGAGCGTTTCTTGAGAGAATTAAATTTCATTTTGACCTGTATTGAGACATGTAAAAGTGGTATAAAACCGACCTAATCTTAATGGATGGACGTCC
AAAGAATTACCCGAAAAGACCCTCCACTTAAATTACCTAAAACGTCCCTCCTAAATTGACTACAACTAGGATAACATTTGACTTAGGGTCTCGAGTTTTT
AACGGAGTTTGGAAAGAAGAGCGTTTCTTGAGAGAATTAAATTTCATTTTGATCTGATTTTAGACATGTAAAAGTGGTATAAAACTGACCTAATGTCAAT
ATATGGACGTCTAAAGAATCACCCGAAAAGACCTTCCACTTAAATTACCTAAAACGGCCCTCCTAAATTGACTACAACTAGGAGAACATTTGACTTAGGG
TCTCGAGTTTTGACAAGGATTTAAATTAATTAATTCAGTTGTTAATTTAATTAATTAAGTGATCTAGGATAATTACTAAAGTACCCCTAAGTCGTTAGGA
CCATAACCAACCCCTTTAGACCATCCTAGGTTAGGTACTAGGACAATTCTTTAGTTAGTTACTCGTCTAGTGTCACCCGGTTATGTCTTAGGCTGTTGGG
TGCA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.952383
Expected error %
0.551285
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0224G23
Clone
Clone name
hba-224g23
LE_HBa0224G23
C07HBa0224G23
P224G23
Clone type
BAC
Contamination
none
Estimated length
106,615
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found