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Clone Read LE_HBa0213F03_SP6_374248

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0213F03_SP6_374248
Primer
SP6
ID from Seq. Facility
LE_HBa_213_F03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
661 trimmed for vector and quality, 993 raw
Sequence
>LE_HBa0213F03_SP6_374248 (raw untrimmed)
CTTTNNCCAGTCCTTTGGTGAGTTGAAATAAGCCATGTGGGCTAGAAGAAGTTAAATTGGATTGGAGCCAATCTGGAGAGCAACGGTTAAATGGGTTGAA
TGAACTTGACCATTTTCGCTTGAAAGCCTATGAAAGCTCAGCCCTATATAAAGAAAAGATGAAGAAGTATCATGACAACAAAATTGAAAAACGAGAGTTT
ATGGTCGGGGATTTAGTGCTTCTATTCAATTCCAGATTGCGCTTGTTTCCAGGCAAACTCAAGTCCAAATGGATTGGTCCTTACATGGTTACCCAACTAT
TCCCTCATGGAGAAGTTGAGTTGGAAACTAAGGAGGGTGTGCGGTTCAAGGTAAATGGACAGCGCATAAAAATCTATCTAGGGCATGTTGAATCGGCGAA
TGAAGTGATTGAGGCATACCATCTTGATGAAGTCTGAGTAATCAAGTGGCCCCAGTCGTGCCGCGACATTAAATCTGGCGCTTGTTGGGAGGCAACCCAA
TACTTATCGTCTTTTTAATAATGGTAGAATTTTTTCTATAAATGGGTTTTAAATTTGCAGGCACATCACCAGGAAATTCTGCAGAAAACTACTCCGCAGT
AGCCACTGATGGATACAACGACGGACCGTTGCGCATGAAACGAACCGTCGTATGCATCCGTCACACCAGGTACGTATTTCTATCATTTTTGAAATTAGGA
CACACACGACGGAACCTACGATGGGGCTTTGCAAGTGCGAACGACCGTCCTCGGGGGACCGTCACGCGAATAATGAAATTTACCTGAACCGACCCGGCTG
GAACCCTTTTTCAAAATTTGACCTTTTATACTCCCCCACCCCTCCATAATTCCACCCCATTAATTCAAAATTTCCTACAATTTCCCCTCTCTTTTTCACT
TTCCCAACCTTCCCCCACGGGATTATAAACTCCCAAAATTTCCCCCCAAACCTTACCATTATTATCCACAAAGGGGGGCCTGCTGCTAATGGA
>LE_HBa0213F03_SP6_374248 (trimmed for quality and cloning vector)
AAGCCATGTGGGCTAGAAGAAGTTAAATTGGATTGGAGCCAATCTGGAGAGCAACGGTTAAATGGGTTGAATGAACTTGACCATTTTCGCTTGAAAGCCT
ATGAAAGCTCAGCCCTATATAAAGAAAAGATGAAGAAGTATCATGACAACAAAATTGAAAAACGAGAGTTTATGGTCGGGGATTTAGTGCTTCTATTCAA
TTCCAGATTGCGCTTGTTTCCAGGCAAACTCAAGTCCAAATGGATTGGTCCTTACATGGTTACCCAACTATTCCCTCATGGAGAAGTTGAGTTGGAAACT
AAGGAGGGTGTGCGGTTCAAGGTAAATGGACAGCGCATAAAAATCTATCTAGGGCATGTTGAATCGGCGAATGAAGTGATTGAGGCATACCATCTTGATG
AAGTCTGAGTAATCAAGTGGCCCCAGTCGTGCCGCGACATTAAATCTGGCGCTTGTTGGGAGGCAACCCAATACTTATCGTCTTTTTAATAATGGTAGAA
TTTTTTCTATAAATGGGTTTTAAATTTGCAGGCACATCACCAGGAAATTCTGCAGAAAACTACTCCGCAGTAGCCACTGATGGATACAACGACGGACCGT
TGCGCATGAAACGAACCGTCGTATGCATCCGTCACACCAGGTACGTATTTCTATCATTTTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.977368
Expected error %
0.448956
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0213F03
Clone
Clone name
hba-213f3
LE_HBa0213F03
P213F03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found