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Clone Read LE_HBa0211K01_SP6_372948

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0211K01_SP6_372948
Primer
SP6
ID from Seq. Facility
LE_HBa_211_K01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
11 trimmed for vector and quality, 903 raw
Sequence
>LE_HBa0211K01_SP6_372948 (raw untrimmed)
CGCTGGGGACCATTATGCTTTGAGTGCGGGAATGGCGCGAATGTGTCGATCGTTGTGGACGTCTATCTGGTGCTTTGCTCCGACCGTGAGCTCGTTGGTA
GTGGAATCATCTTAACCTCTGCGCTCGTTGAGACATGTTGTGCGGCCTGTACATAATGCATTTAACACTCCATTGGGAGCAGTGGATTCCTGGGATAGGC
GAATCTACTCTAAAATCTTATAATTGATGCATCTCTTCTGAGGCTATCTCTCCATATAGCATTAGTTTTCTCACGCGGCTAACGCTTTCGATATTCGAGG
CCAGATGAAATCT
TGTGATTCTTCCAAAATATGACGAACGTGGAAGTGATTTCGACATCTTGTGCAAATCGGTGGCAACAGGCTGCATTAGTGTTCAATT
CGCACTATTACGTTGCTCCCTAGTTAGCTTGGCCACTGGAGATGCTGCCTGGCTTGATGCCTGACGGCAACCATACTGTCTAGCGATCCCAACCATATGA
GGCTTAAACTGCCTGGTTAGGAGAGGAACGTGCACATACTCTCCCCTGCCTGGTTCGTCTGGGTAGCACCATTGTTCCTTCGTCGTAGACTAAGTGTGGC
ACAACCGATCTCTATCCATGCCCATATTCATGTTCGGATCACTTAGCTCTAGAGATCCTATGCTGTCGAGGTTTGGAAGGCTTCACTCGAGTGACAACCC
TGGTGCCATCATGCCTGAAACGAGTCAAACTCTTGACTCAGCTCGATGAGAGCCCACTTGTCTTAAGGACATGAATGGTTTTCCAAAGCCCTATAATCCA
GTTCGAAACATCGGTGGAGCCAAAGGCTACTGGATGATTGCCTTATAGTGGACACTTTAAGCCTTGTCCAATAGCCTTTGGGAAGGTGGGGGTTTCGCCT
TCT
>LE_HBa0211K01_SP6_372948 (trimmed for quality and cloning vector)
TGTGATTCTTC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.744186
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0211K01
Clone
Clone name
hba-211k1
LE_HBa0211K01
P211K01
Clone type
BAC
Contamination
none
Estimated length
131,127
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found