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Clone Read LE_HBa0210F09_T7_372212

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0210F09_T7_372212
Primer
T7
ID from Seq. Facility
LE_HBa_210_F09-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 2575 raw
Sequence
>LE_HBa0210F09_T7_372212 (raw untrimmed)
CTATATGATACAACTACACTANTCACTCNTCACACCGATGCATACGTGCAGAGACAGTCTGCCACNCANCACATACATNCATAACACACATGACCNTATA
TGACCACNCNACGTANTTATGTAATAACGTTGTACAGNCTATCTACACTTATGTCTACCACCATATTGCACACTTACCACATATTACACTATCGCACGCA
TACTAATACTATATGCTCACCTTCTCTCATCGACGTCTACATCTCTAGGTGAGGAGAAGCGTGGCTCTCTACNCACACTACTACACTCCTAGTCACTCAT
GCTACCCATACTGATATCACTACTTATATCTATCTAATNANTACAATAGNCCCTACGTCTCATGGNGACTGNCATGTTAGNCACATCTACTGTAGTATCC
ATCTGACTACCGACTAATGACCCACTCGCCGACTATTATATCCGCTAAGAATGGGTCGCGTACTATCTTNTGATCTCTTGACGTCTCTGACTTACGCATT
ACTCGATCATGCCTTCTATCTCTGATCTACACATACACTAAGGTGTATACTACGTAATACTACTACTATCTTCTTACTATAGTGCTCGTTCTATAACTAT
ATTCACCTCGCTGTGCTATACATATACACTTCTNACACTNGACACTACATTACAACACGCTACTTACGCTAAANGACTACATCATATACATCNCTTAACG
TGCTACAATCATGTNGCACAGACGATCTACACAGTGCCATACTCATATACTCTTCATTACAAGCGGATACCGTGTACTTTACATACTTCATCATCTCATC
TCTCTATCTGCCATCATCTGATTCCACTGCTATATCACACATCATGCTACTTCTACATCATCTACCATCTATATCTTGACCTCCTCTCACCACACGTTCA
CTCATCGCTATCATACGCAGCATGCATACGATCACCTACTATCTCAACTGCNTGTACTGAGCTNCTCTACAAATTATGATCTCTCACTCGCTCTACTCTA
CTCCATCATACACGCAATCCCACCTCATCCACTATACACTCACTCTCCTTTCGCGATAGCATATAATATCCATCACCCATAGAGATCGTGTACAACTACA
TTATACTAACGACGCCGTACTTTGCCGCTTACCTAGGTCATATATTATACTCTATTTCACCATTTNTGCATTCTAGCTCTACATACTCAGCATATTTCAT
ACTATCNCATCGACGATATCCTCTCGCATACTCCACCATGCNCTCTAACATATCACTATATACACTACTGGATACTCCTGTCTCTGACAATCTCCATCCT
AGTCTTCCACTACACTATATTATACAATAGGCAACACACTCACCATCATCCTATGTTCNACATACTACACCTATCTATTACAGCACCGACNCCTATACCG
TCGATTTCATATTCACTCTCACGCCGCTCTCATCATGTTCAATGATACTCTCTTACATACGTACTGTATCATCTTACGCTTTCCTATCTTGTCACAACTA
CATATCTCCTATCCCTAACGTATAACATCGCTGACTCTAGTTACTCACNTACTACCGTCTTACAGTATCACATATNACTAACTATACACTCAACGACAGC
TCATGCTCACTGCAACTAATATAGATTAGTGTAGTAGCTCTATACTCACTCTGTCATATTCTNCTCATAATCTATCCTCTCACATCATATATCTTACACT
TGCTAATCTCGTCTGTTCATACTCATAATACTCACACNATCCTACATATATCACTCGTCGCCCTCGTGCTAGCGTCATTCTATCTACGTGCGAACACANA
CTTGCATNGTCTATTACTTCTCAGATAATATCATACTAGCAACCTATACTGTACATCAGTGTCACTACTGCTACATCTATTACTCCTCATTTTCNATCCG
ATTGCACGTCCACANCACGACTTGCTAATACGCTCACTATCATCATATCTACTCTAGCATCATCTTATATTACTGCATCCACTACTCATCAACAATCCTT
GTCTATACATCACTCATCTTATACATTACTACGCATCTACCTCTTCGATCCTCGAAACTACATATAGCCTCACACACTTCACTACCTATACACTACCTAT
CTCTCGCACTTATCACTATCTCTGTACCTACTCTATCCGCTCATCCACTTCGCTCGTCCCAACNCNCCTACCACACTATGTACACATTATACACTCTGCA
CTACTTACACGTCCACACGATCTAACTGCTATACAATATACTAGTCACATTAACTCATCACGCCTACTTATACTACTCACTATCACACATTGTACAATCT
ACCTGTACTATCCTCATACTCACTCATACACTACACACAACTACGCCTATTTCTCTATCNACTTATTACTCTATATTCATTCTAGTACGAGACTATGTCG
CGTCACACTCAACACATCTAACGATCGTACTGTTACACACTCACTCACTCTCCTTAGCTCGCTCTCTATCCTCCACTGCATTTCGTCTACTACCTCTTGC
ACATACTACAGCTACACATATCACCTCATCGACATCTCTCATACCTCACTTCTTCACTTATATATACCCTGTACA
>LE_HBa0210F09_T7_372212 (trimmed for quality and cloning vector)
C

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0210F09
Clone
Clone name
hba-210f9
LE_HBa0210F09
C01HBa0210F09
P210F09
Clone type
BAC
Contamination
none
Estimated length
134,286
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found