Clone Read LE_HBa0209E19_SP6_371544

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0209E19_SP6_371544
Primer
SP6
ID from Seq. Facility
LE_HBa_209_E19-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
574 trimmed for vector and quality, 976 raw
Sequence
>LE_HBa0209E19_SP6_371544 (raw untrimmed)
NNNCAGTCNTGGAGGGAGGCTATTACTGCTTGCGGCCTGAGGGCCTGTGACAGCTGGTTTCTCTGAACTTAAATTCTTGGATTTATTAATAATTGATATC
GATATGTTTCAGGGTCATACTCTTTCCTCATTGTGTTGTGGGTTCCCGTGTCTCATTACGTTTACTACTTTACAAGTCAATATTAAAGCTTCGAATGATT
GACTGTCTGTTCTGATTTCTGAATAAATCTTCTGGATGTTTTGGTTTGGCCCTGTCGTAAGACCTGTTTTTCTTACAGCTGAATAACAATTATTATTCCA
TAATGTAGCTGCATGAGGTCTTTTGTACTATGATTTTCTTTTTTAATCCTGTTTGGTTTCCATTTTCCACCTATTGAACTTATTCNCCCTGCGGCAGGTG
GAAGGGAGAGTCTGCATGTCGAGGGAGGCTAAATTGGAATTTTTGAAGCGAAAGAGGCTTCAACGAATGAAAACAGAATCTTTGAATGATCTTTCTTGTG
TCAGCAATATGCTGAGTAGAAGCGGAGGAGATGCCCTACGATCTTCTGCTTCATGTGGTGTTAGAATCCAGGTTAATACTGATTCATATCCAGGATCTGG
GGCTTCTTTTAATGGAAAGGATAATTTCTCAAAGCACAACGTAGCAAAGTTTGACACTTCCAATCTGGACTGNATCGATAAAATCCCAGATTGTCCAGTA
TACTGTCCAACTAAAGAGAAGTTTGAGGATCCCTTAATTTATCTCCAGAAATTAGCTTCCCAAACCTTCTAAATTTGGAAAGGCTCCATGGTTTTAATTT
GCTCCCCAAACGAATTTCAGGTTTTTGCTTTGACTCTGCATTCTGCGAAAAATGTGTAACCTTTTTTTCTTTGGAAGTTCCCCTTTAAAAAAAAAAATAA
ATTATTCCCACCTTTTTCTTGAATTTTCCTGCTGGTAAAAATTCTTCCATAAGAATTTTTCTTGGATGGGGTTAAT
>LE_HBa0209E19_SP6_371544 (trimmed for quality and cloning vector)
TGCTTGCGGCCTGAGGGCCTGTGACAGCTGGTTTCTCTGAACTTAAATTCTTGGATTTATTAATAATTGATATCGATATGTTTCAGGGTCATACTCTTTC
CTCATTGTGTTGTGGGTTCCCGTGTCTCATTACGTTTACTACTTTACAAGTCAATATTAAAGCTTCGAATGATTGACTGTCTGTTCTGATTTCTGAATAA
ATCTTCTGGATGTTTTGGTTTGGCCCTGTCGTAAGACCTGTTTTTCTTACAGCTGAATAACAATTATTATTCCATAATGTAGCTGCATGAGGTCTTTTGT
ACTATGATTTTCTTTTTTAATCCTGTTTGGTTTCCATTTTCCACCTATTGAACTTATTCNCCCTGCGGCAGGTGGAAGGGAGAGTCTGCATGTCGAGGGA
GGCTAAATTGGAATTTTTGAAGCGAAAGAGGCTTCAACGAATGAAAACAGAATCTTTGAATGATCTTTCTTGTGTCAGCAATATGCTGAGTAGAAGCGGA
GGAGATGCCCTACGATCTTCTGCTTCATGTGGTGTTAGAATCCAGGTTAATACTGATTCATATCCAGGATCTGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.958233
Expected error %
0.511815
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0209E19
Clone
Clone name
hba-209e19
LE_HBa0209E19
C08HBa0209E19
P209E19
Clone type
BAC
Contamination
none
Estimated length
61,342
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found