Clone Read LE_HBa0208A03_SP6_370934

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0208A03_SP6_370934
Primer
SP6
ID from Seq. Facility
LE_HBa_208_A03-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1234 raw
Sequence
>LE_HBa0208A03_SP6_370934 (raw untrimmed)
ATCCCCGATGGGGAGGGGGCCCNCCANANNTTTTTGNANNAAAANACCACCAAAANNAANCGACAGCCCCCTAAGAGGGGGGGACCGANNNNGNACNTTG
AGGGAGGAGGGAACACCGACCAGCCGCCCACCACGCGAGGCAACCACGACCCAGGGCAGAAGACAAGACGGGCCAATTTTCTCAGAGAGAACGTAATAAT
GGCCCGAGCAAGAGCCACTATAAGTGTCCGGAGGAGGATGCATGATGCCGCCTCCCAAAGAGAGACCTGTGCCCCAAAATAGCTATGCTCCAGAACCTAG
CCATCAGCTTTCAGCCTCTGCACCTATAACCTTAGTTCCCAGACCGATGTAAATAAGCCAGAACTAAAAGTTAGCAACAGTGACGCGCCACTACTGGTGC
CGAGAGCGCAGAAGCCATTTCCTAGCGAATGACCGACGGGAACACATGAGCATATGTTACACAAACGCAGCCACCGCACTAAAAGCAATGCCGAGCACGA
CACAGTTCTCGGCGCCGAGAGAGGGCGCGTAGTCAACGAAACCACGTCGCACGCCAGACAGACTCAGCTCCCTGCGTCTCGCGAACCGGACACGGGCATC
CAGACAACCAAAGCCTCGAAGCTGACCTTACAGCACCTCCCTCCCGGACTACTACACCTCATCTGCCACCTCGCGACTCCACCCACCAAAACCCGCCCCC
TGATCCGCGCTGCCGGCACTACACCGAGACGCGTTAACATCACCCGCACACCACTCCCGACAAACACCCTCTACCCCAGCCCGCCCGTCTCCCTCAGCGG
GGCGCCACCGGAAATCGCACAACCACCACCCTCACACACTCCCGCTCAACCACCACTCTGGCCCCCTGAATACTCCCCACCTTCCCGATCCGCGCCGCGC
CATCAAACTCAGGCGCTATCCTCCATCCACGAGCGCGCAACCACACACACAGGCACACACCGACCCCGCGTCACACAGCACCACCCCCACCCCCCCCCCC
CCCGCACCCCCGCCCCCAACGGTATGCGCTCCACACTACCCCACCGCCACCACGCCCCCCCCCGCCGGACCCACATTCACCTCCCCCCACCCCCGGGGAC
ACTCTCCTCCCCCCACACTACACTACTCTACTCTCCCACCCCCCGCCTCCCCTCCCCACTCCTCCCACACGGAACACTCCACGACCACCCGCCCGCCCGG
CACGCGTCCACACTCTCACCCCACACCCCGCGTC
>LE_HBa0208A03_SP6_370934 (trimmed for quality and cloning vector)
CC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.880056
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0208A03
Clone
Clone name
hba-208a3
LE_HBa0208A03
P208A03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found