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Clone Read LE_HBa0207B16_T7_370243

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0207B16_T7_370243
Primer
T7
ID from Seq. Facility
LE_HBa_207_B16-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1778 raw
Sequence
>LE_HBa0207B16_T7_370243 (raw untrimmed)
GGCGCTTACACTGGTTCATATGCCAAGGACCCGACACCCTTATTCTATGAACTTAAGTGGATAAATCTTTACGGTTATATTAGCCCCCGGTAGTGAGGTG
ATGATGGAACTTGCANACAACGTCATTTCTTCTCTGCATTACCATTGTCTACATGCGAGCCTACCCCTTGTTCACAATGATGAAGAACCCACTGTACCTT
AGTATACATAGGCGAGGTGCCCAACGCACAATATCAGATTACATCTAGATCTAAACTGTAGTGCTAACCTATCTATCATACGACTCAGTAACCTAGGTAT
TAATAATGCAGTCGACGATTGAAGTACATATACTCAACTTAATCATATTGCATGACCCTACAGGGACATGTGACCTCACAAATTGTAGAGCTAAGCACCT
GTCAATAAGTCTACGTATATTCAGTATCATTTATTATCTGATGAATGTCTATACATCAACTCAGCTCGTCTATCTCTCATCTATAGATACGACTAATACA
ACTTGAACCCCTCGTTATTACTTGTACCTCATTTCTGCACTTGTAATCGAAGTCATCTGAATAGACTCGCTCCCTCGTGACATTACTATCGATATAATTG
TCACTATGATCATAGGCTATATATAAATCATCTATCGCGTATATGCACTCTTGTCAATAGACTAAATGCTCATNATAACTAATGTATTCTCGAAAACACG
TGTTCGTACCATTGCCCTTACATGTTATCAGATATCATATGTAACGACTTGTGTGAATCTACATGAAGCAGCTAGTATTTTCTACTCGATATGATCGCCG
CAAGAGGATGCACGCTATTAATTATATAGANTCCTTATAGCTCAGCAACTGTATCGTCTACTAACATATTACGTATACAACCATGNAGATTAGTTCGTTA
CCACTAGTTACCATCACTCATACNCCTCCTACAATTANCTATTGTCTACCATAATGATGCATGCTGTCTGTATACTCTGTCATCTACTATGTCTGTTTAG
ATTAGACATTAACAGTGACTCTATACGTCATACAGGCTCTTTCTACGAAGCTTACTCTAATGATACCTCTATGTGTACACTAGATGCCCATCTAAGTCAC
TCATGGATAGTGATATATTGAACCTATATNAATAGACTCTANATATACTATATATTATCGATACGCGAGAGATGCTGCGCTCATTAGACTATAATAGTAA
TCAAGATGTAACTGGACTGTACGTATGGACCACTGATATGCTCAATAGTATATACATATGATCGCCTCTGTTCAATCTCTCAGACTTAGACATATGTACN
CATAGTGCATGATCAGATACACGCCATACTCTTGTGAACGTAAATCTCATCATCACATCATACATACTAATAACCGTATGTCCATACCATATAGTGTTGG
TTGTAAATAAGTGNTCTTCGCTGTGCTACACACTCAGCATAACACATGTAGTGATGATATCAACTACTATATATAGTCTGTACGGACACTTATCTAGCAA
TCAGATTGNTATATCTATATCTGCTAATATTACTATTGCTATATGCTCTGCGGTAATGTACTATACACAATTACTTATCTACTCTCATTCTGCTAACCTC
CTANCTATCATACTTACGTGATACATCATAGTCTACGCGATACGACTANTGTAACTAAACTCGATGTCATGTATACTGATGTCGTTATTCTAGATNATAC
TAGCTGTACACACTCGATATGCACTCCACCGTCGAATACTGTGAGATACAGATAATCTCATCTCATAGCGACTGCACN
>LE_HBa0207B16_T7_370243 (trimmed for quality and cloning vector)
G

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0207B16
Clone
Clone name
hba-207b16
LE_HBa0207B16
P207B16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found