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Clone Read LE_HBa0008N02_SP6_3698

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0008N02_SP6_3698
Primer
SP6
ID from Seq. Facility
LE_HBa_008_N02-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
641 trimmed for vector and quality, 899 raw
Genbank Accession
DU023779
Sequence
>LE_HBa0008N02_SP6_3698 (raw untrimmed)
AATTTCCTTTATCCATATTTCCATAAAAGCTTTTCATGTGAGTATCAATAGATTTTTCAGGATGTCCACGTGTAAACTNTTGGGCTAAATAAGAAAATAT
AACGCTAAAGTTATTTGAACAAAATCTTGATTTAGAGGTCGAATAACGATCTGTTTTAGCTGAAAGTTTGCATACGAATTTGTTTTACTATTGGTGAACG
TAATCTAAAAGAAAATTTAAGATTAAAATTTGATGGCTCGGGATGATTTTTTGATCTAATTTTTCAAACCGATACTACATATAGTAATATGAGTGTCATT
AGATTCGTATTCTTACGAGGACTATATATTTGATAGATTAAAAGCAATTTAAAGTTTTATGAAGGGGGAAGATTCAAGTCCTATTCAATTGATTGAGGCA
AGTAGATTTTTAAGTCGTTGTTAAGTGTATAGAATCTTGTATTTCCTTGTAGTATGTGTTTGAGAGTAATGAGACTTGGTGATGGGTTGAGTTTTCCATA
TTGAATAATTCAAACAATGAAAAAGGGGTGATAAAAAAGCAATATGACTAATTATTGGAGTGTGATATGTTGAGAACAGTTTGAAAGACATTGATTCATT
GCTGATATTGTATCACAATTTTTTTTGTTGTGAATTCTACATTATTTATGTAAATTGACCCATGACCTTTCAAATTAAAGATCTCTAAACCCTCCTTCCC
ATGTCACCGAGTTTGTTAAGATCTAATTACATTGTAAGTAGTTTTACTCATTTTAGTGAAGCCCTATTGGGACAAAAATCTTCACGATTGCTTAGACGGC
CTTGGTCTTCTGGCCACTCGTGGAGGGTTGGCTGAAGTTACTTCACACCTTTAAGCCGGGGTCACTTAATTTTTTAGGGATGGCGATAAACTAATTTGT
>LE_HBa0008N02_SP6_3698 (trimmed for quality and cloning vector)
TGTGAGTATCAATAGATTTTTCAGGATGTCCACGTGTAAACTNTTGGGCTAAATAAGAAAATATAACGCTAAAGTTATTTGAACAAAATCTTGATTTAGA
GGTCGAATAACGATCTGTTTTAGCTGAAAGTTTGCATACGAATTTGTTTTACTATTGGTGAACGTAATCTAAAAGAAAATTTAAGATTAAAATTTGATGG
CTCGGGATGATTTTTTGATCTAATTTTTCAAACCGATACTACATATAGTAATATGAGTGTCATTAGATTCGTATTCTTACGAGGACTATATATTTGATAG
ATTAAAAGCAATTTAAAGTTTTATGAAGGGGGAAGATTCAAGTCCTATTCAATTGATTGAGGCAAGTAGATTTTTAAGTCGTTGTTAAGTGTATAGAATC
TTGTATTTCCTTGTAGTATGTGTTTGAGAGTAATGAGACTTGGTGATGGGTTGAGTTTTCCATATTGAATAATTCAAACAATGAAAAAGGGGTGATAAAA
AAGCAATATGACTAATTATTGGAGTGTGATATGTTGAGAACAGTTTGAAAGACATTGATTCATTGCTGATATTGTATCACAATTTTTTTTGTTGTGAATT
CTACATTATTTATGTAAATTGACCCATGACCTTTCAAATTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.919457
Expected error %
0.796224
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0008N02
Clone
Clone name
hba-8n2
LE_HBa0008N02
P008N02
Clone type
BAC
Contamination
none
Estimated length
118,604
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found