Clone Read LE_HBa0205G15_T7_368945

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0205G15_T7_368945
Primer
T7
ID from Seq. Facility
LE_HBa_205_G15-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1958 raw
Sequence
>LE_HBa0205G15_T7_368945 (raw untrimmed)
AAAGTCGAAACACTGTGCAGGCGCAAGTGGTCAAGGACCATGACTTCAATAAATATGAGATTGCGATGACGGCATGCATCTACACATACTTATGTTTNGC
CCCTATGGCATGTANCNTAGTGTAGAATGTACTCAATATTGTATCTCAACAACATGTGGTACATTTTATATGAATAAGCCACCAGCCCACTATTTGTGAT
CATACGAGGACTATACAGTCTGACAGAAACTTGATGTCAACACAATAGTATATCTCTGCTACTGATGTCGCGTAGAAAGACTTAATGCGATCTACACAAG
ACCTAGTCTACTCCGCTGCCATATCGTAGCGGCCAAATCGCTCGCACTACTCTAAGTCTGCGAGCATAGTAGATTTACATGATCTAGTGAGGAGCATTAG
TAATCGGAGGCTGTTACTCACGCTAANGTTAGGACATTGAGTCATATGCCGCAGACATAGAGTTAGTCCGCACAGATTAACGCACACACGCATCTAGAGT
ACCTGAGACATCGGTCTTTTTTACTTCTTGGAATCATGCGTAGAGCGCGAAATGCATCTGTACAATCATCTTCAGAGTAATAGTNGAGGCTATCGCAGAG
CACTTAAATGAGCGACATTCCTCATCAATCACCTCTACTCGATAGCCGGATGTTATAATAGTATCTGCTGGACACACACCTTGTACCTCTAGTGATATAG
GACGTATGGATAGCTATTAATCAGTGCGCTCGTAACGCCTATACGANCATCCTAACACTATCGATGCTATGTAGATTANCTTCAGCGCATATAAATATCT
AGAGATATTCATGTTACTGATATACGCATCTCAAACGGACAAACGATGGAACCTTAGATGACGTGCTACCATCCTTCTCTTAAGTCGTTCTATCAATACG
CGTAATAGATGATGTCTACATNCTATGGACTTTGAAGTATTACAAATGATGNCACCCTTAATGACTAACCATACGTCACCAGAATATGTCCTTGAACATA
TGTATTAGTTGTATCTGCTTCGGCAGTACCGACATTAACAAGTACACGCAACTGCTNGATAAAATGGAATTCTATACAGCTNGTACCGAGTTCTCGTTCC
CTACATACTGCGCGGTCTGAACACACTATAATATACCACAGCAACCAAACGTGGTCTTGTGGCTGTATATNCTGCTAATACACATCTGGTTCTGTTCAGA
CTCTTACAGCCCTGATTCAGTTACCTATCTTCGACATATAATCCATCAGACTATCTCACTCTTGTATCTGCGTAAGTGCCCGTAACTCCCTTNGATACAN
GATATACTGANAAGTTTCTCAGATTAGCTCGGAACTCTTGCACCGCAATTCTACCTATCTAGAGGATATATGACTCTCACCGATCATGTACATTGTCATG
ATATTCTCCTACAAACNTNGTGACGTCGCTGTAGAGGTACGTGACACAGATTAGTTATAGTGATCTCGCACTCGCATACAATATATATTACTTATGCACC
GTGTGTCTACACACACAATCTTACAATTCGTTTTGACATCATGTCTCCTGACTGTGCACGTGNCNAATACTACACAAGACATGTGCCTGATATCTTCGTC
TNCTTGCGATGCACTAATACATACTAGGAGGCTGCTCAGCTNAGTTATNCAACGCACATGCACCTCATCTCTTATCAGAATGACATTCTTATTCTCACTT
CGTNTAGAGCGTACCTCACTAGACAACACATGAAACTGGTGTCATNCACCTTGATCGACATCTACAANAATTGACTCCGCACCATACGATCATTCAGCCN
CTCCTCACGCTGATGTTATTGCTGGAACGATAACAGAGTTTACTCTACAACAACTATATATCAATAACACTACGATCGCAGCGAGTGACATATGTACACT
AGCTAACACATTGCCGATCATAAGAGTTCTTAANACTGATACGATGTGCACTCACATG
>LE_HBa0205G15_T7_368945 (trimmed for quality and cloning vector)
A

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0205G15
Clone
Clone name
hba-205g15
LE_HBa0205G15
P205G15
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found