Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0111N18_SP6_36370

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0111N18_SP6_36370
Primer
SP6
ID from Seq. Facility
LE_HBa_111_N18-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
357 trimmed for vector and quality, 861 raw
Genbank Accession
DU088658
Sequence
>LE_HBa0111N18_SP6_36370 (raw untrimmed)
ATTGGGTGGTCTGAAATTTTCATTACGTCCAGCTTGAGGGAGGGTATTGGAGATAATACAGAATTAAGCGCAATAATTATATATGTTGATTAGTTAGTTA
GTTAGGAGTTAGTTAATTTGTTAATGAGTTAGTTGGGTTAGTTAGGAGTTAGTCAATACATTCCACATGTATATATAGTACCATACTTCATCTTTGTAAG
TCAGTTTTTCATATATAAAAAATCAGAAATTTCCCATTCTGATTTTTCTCTTCTACTCTGTTCATATTTGTTCAACCAAAACTGATTCTGAACATATATT
TTATTCCATTCAACTCCATATATAAAATTCAAGAATTTTTTCACATTCAACTGAATTCAAAGACATTACAAATCACTACTAATCATAAACTTTTTGAATC
CCACGTGATTCAACTATTCACTGTGGATATTCCTGCAAAATGATGGCATGAGCAAGTTCTCTTCTTGACACCTCTTCGAAAAACTATTGTTTGTTGGTTG
TCTGAATTCACTCCCTGACTCCACTCGTCAGTTCTAAAGTCTTGTTAGTTTTCTTGGCATTCGCCTCGAAATAGTGTACTCTACTTTTATATATTTGCTC
TCTAACTATCCACCTCTCATCTCTCATCTATTACTCTCTATTATATTCAAGACAGGCGACTTATGAAATATTAATCATTCCCTTTATTCTGCCACATAAC
TTTCACTTCTCATCATATTAATCTATTTCCTACATTATGCAGACTTACCTATTACTCCTCTTCTTTTATTTCTGCTTACTGTCATACCCTTTCTGCTCCT
TCCATCCTTCCTTTTCTTTTACTTTTCGCTCCCCCTTATTCTTTTTGCCCTCTCTCTCCTC
>LE_HBa0111N18_SP6_36370 (trimmed for quality and cloning vector)
CCAGCTTGAGGGAGGGTATTGGAGATAATACAGAATTAAGCGCAATAATTATATATGTTGATTAGTTAGTTAGTTAGGAGTTAGTTAATTTGTTAATGAG
TTAGTTGGGTTAGTTAGGAGTTAGTCAATACATTCCACATGTATATATAGTACCATACTTCATCTTTGTAAGTCAGTTTTTCATATATAAAAAATCAGAA
ATTTCCCATTCTGATTTTTCTCTTCTACTCTGTTCATATTTGTTCAACCAAAACTGATTCTGAACATATATTTTATTCCATTCAACTCCATATATAAAAT
TCAAGAATTTTTTCACATTCAACTGAATTCAAAGACATTACAAATCACTACTAATCA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.900153
Expected error %
1.597
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0111N18
Clone
Clone name
hba-111n18
LE_HBa0111N18
P111N18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found