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Clone Read LE_HBa0111L01_T7_36241

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0111L01_T7_36241
Primer
T7
ID from Seq. Facility
LE_HBa_111_L01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1126 raw
Sequence
>LE_HBa0111L01_T7_36241 (raw untrimmed)
TTACGTCAGGCTTGTATTTCTATTCTCACGTGTCTTTTCGGAGGCCCCATCCACTCCTGCTATTATGTGGTATGCATAGACTTGTGTTTATATAAAATGT
GAATTGAAACAAAAGACGTTATAACGATAAAAACAAAAACCAAGATTGGACAGTAAAAATCCGTCTCTTAGATTAGCTTAATTGCGCGACGTGAGCAATA
CATTCATGGTCCGCAACACTCCCATACCAGCACTCCACCCCTCGCGTGTCGGTCGTTTAATCGATAAGCCACCCCTCAGTTGGGTTCTGTGTGTGGTCAT
CCTGCTCTGCGATGTACGTACTTTGTATAAGCTGGTAACGTGTGTTCGGTGACAATGAGCAATAACGCAGTCACAACACTGATGAACTGAGACAGACATC
GTATAGCTTAGTAAGCGAGTATCAGCGGTGACGCACTCTATTGCCTCCTTGGAGATTGAAGCCATTCATATTCGCATTTCTCTTTTGTCTGTGTGACATA
GTGGTAGATGAATAATTCTACTTCGTTCCTATGTGTTTGCGAGAATTTGATGTATCTATAGTATGGGCACAGACCAGTAGGAATACCCGATCGCATGATC
ATATGATGTAGAAGGGAAATACAATGAGATAGTGTCGAACACTACTGAGATGTATATCTGCGAGACGGCGCGATGATACTATATCATGTTACCGTTACTT
TCTCCCTCTCGACTGCCTATCTGATATCACATTATGGCTGTCGATATCGTCTGTACACAGACGGTAATATCTCGATTTTTTGTGCTCTCTTGTTATTGTT
CTTGTAATTATTACTAATTGTTATAGTTGGTACGACAATACTTATTTTGTCTAGTATTTGTGTTGTTTTTCAAGCATCTGAACATATGGTCGTGTTGATC
TTTGAGCGCTGCAACACAGAGTCTACGTATGACAACACGTCGATCCTCGATTAGCACTACCTCCAGACGTCTATTTGACAATATGAGACCCATCTTAGAG
ATCCGACAACATAACTTTCTGTGTTCTACAACGAGGAAGATTCTTATAGGATATTTAAATCTGAACAATTGATACGAAGAGACGAGACTATGAAAAGTCC
ACACAAATGAAATAGCGCATATAACA
>LE_HBa0111L01_T7_36241 (trimmed for quality and cloning vector)
T

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0111L01
Clone
Clone name
hba-111l1
LE_HBa0111L01
P111L01
Clone type
BAC
Contamination
none
Estimated length
87,037
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found