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Clone Read LE_HBa0111G23_SP6_36044

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0111G23_SP6_36044
Primer
SP6
ID from Seq. Facility
LE_HBa_111_G23-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
10 trimmed for vector and quality, 983 raw
Sequence
>LE_HBa0111G23_SP6_36044 (raw untrimmed)
AACATACATGTGGTAAAGAAAGTCAGAGAGGTTAAGTTGGAAGAGAAGAGTGGATGCGAAATTATGAGAATCAAAGTTTATAGATAAGATTTGCCCTCTT
AAAATAAAGCATTATAAGTTTACATGTGATGGTTGGAAGTCACCTCTCGTGAATGAGGAGAGTATATCGGGCTAGACATGTTGTATTTTTGAGGTGGTTT
GAATTATTGTTTGTTTTTTATATTTTTTTCGTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTCCATTTTTATTATTTTTTGTTTATTTTGTATATTATCAT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTAATTTGAAATTATTTTGATTTTATTATAAGAGAGTTAAAATGATTGATAAAATTTTTTTTTTATTTT
TTTTTTTTTTATTTTTTTTATTTTATTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTAAAGAAGAGTATAATTTTATATATATATGGATTAGATTGTGT
TTGAGGTGTGAAGGTAAAAAGAGGATTGAGGTTTGATTGTATTATTAAATGAAGGAATGGTGTAAGATGAGGGATGGAGGGGTAGATATATTGAAGGTAT
TGTTTGGATTAATAGTTTGGATAAGAAGTAAGAAAAGTAAAATAGGATATAGTTAAGATTAAAAGTAGGATAGTGTGAATGGAAGTTAATATGTATTAGA
GAAATATGGAATTAATTATATTTTTGTAGTGTATTGATTATATGTTTATTTATATATATATAGAGGTTTGGTTAAGGAATATGAGTAGTTAGATATAAAT
AAAAAATATAAAAAAAAAAAAAGAAATATTAAATAGATTTGTATGTGAGTAAGATATATAAAAGTAGGATGGAGTATAAGAGATGAAAATGGATGAGTAT
ATATTGAGGGTGTGGAAATAGTAATAATGGTGGAGTAAAGATGTTGAGAGAGGTATATGTGTGAGGTATGGGTAGGTGTGTAT
>LE_HBa0111G23_SP6_36044 (trimmed for quality and cloning vector)
TTTTTTTTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.368313
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0111G23
Clone
Clone name
hba-111g23
LE_HBa0111G23
C02HBa0111G23
P111G23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found