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Clone Read LE_HBa0201M14_T7_360399

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0201M14_T7_360399
Primer
T7
ID from Seq. Facility
LE_HBa_201_M14-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1731 raw
Sequence
>LE_HBa0201M14_T7_360399 (raw untrimmed)
CCCTTTAATAAATAAGTGAGGGAGAAGNNGNNNGAANANAGGNNNNGTNGNGAANNNNNNGAGAANNAANAANGNAGGANNNAGGAGAGGAGGGCGCCCA
TTATAAAAGGGGGAGGAGGGNAGNANNTNANAAGAATNCNCTNAAGAAGANAGAAGGAANAAGTGANAGAATTATATGTTAGAGATTTGATGTATTATAT
TTAGTTTAATATAATAGTGTGATCGAATGTGTGAAGAATGTGTGTATATTTCTATGTGGAGTAGTGAAGCTACGATGATGTGTATGTAAATTTAAGNTGA
TGTTATGATATGATGTAGTACATAGAATGTAGAGTGTATGTGTATTGGTATGACATANGAGTATATAATATAGTATATAGTATGTTGTGATATTGTGGAT
GGATAGATTATCTGTAGGNTGTATAGAGGGTGAGTCGTGTTGATTTGAGTAGTGCTATGATTATATAGATGTGATGTAGATAAAGGTAATGTGANTGGAG
AGAGTCTAAGAGATGATTAGAGTTAGTTGAGTGATGGTAATGTATGATAAGTGTATTNGATTCGNCATACTNACATTATAGTGATATAGCATATGTTAGT
ATAGATAGAGAGTATATATAGGAATGTAGAGTAGTTGCGAACAGTGAGTATCATGAANTGGTGGTAATAGATATGGTGCATGTCTTGTGGTTATATGTAC
TACTAGNAGTGATTGTAGGTTAGTAGGTGTTGTGGTTAGAGTGATGATAAGTAATTAATATATAGCGTATGTAGAATCGTTGATTACTNTATATGTCGAT
GTAGTATGATGAGTTATAGTTGTATAGGTTGTGAATGATAATGTGTATATGATGAANTGTATNGTGCTTGAATGTGAGTATAGTATAGAGTGTATGATAG
TGTTGTTATGATGTGAGTAGTACGTGATATGTTATGTGGGTATGTGTATTGTTNTCGTTTGATATGTAGATATATAGCATATATAGAGATGTGATCTATA
TGNTAAAGTAAGATGATATAGTAGAGAGATTGATATATGCATGAATAATTCATGATTAGTAACTAGAAGTAGTCGTGGGAGTGGAGTATAGTTTGTAGAT
ATGATATATATAGGCTAATATACTAGTTTGATGGAGAGTGTAGATGATGTATTAATGNTGGANGTGCAAGATGATGTGAGATAGAAAATATAATAGAATA
GATGGAGATATTATGATTATGTGTGTATGAATGATGATTTAGTATGGTGTGTGCTGTGTTGAATAATAATATAATGAATTGTGGAGATATGTTATAGTGA
GAGGAGGATATGTGGAGTTGAAAACTATGNTATGTTATATGTGTTGAAGTGATTATTGNATGAGTGTATGAGTGGTATGTAGTGAGAATTTGTATGATAT
AGTATAATGATATATAGATGTGTTGTAGATATTATGTATGTAGTAAGTGAACGTGATCGTATGTGTGTAGTATAGTACTATGTGAGTGAGTAATATGATT
TCAATAGTATGTGAGAGANTAGTGTGACATAGTATAGAATGTTTTCTATCTCGAGATGATATAGTAGAATGTGATAATGAGTAGAAGGTTGAGATATAGA
GATGTACATATACGTGANATAGTGGTAGTAGTATGATGTGTGNGAGGGGGTAGATATGTTATGTGTATAATGAGTATAAGATGTGANGATATGCGTAGTT
NGATANTGAATGACTCGTATGTGTGTGTGTG
>LE_HBa0201M14_T7_360399 (trimmed for quality and cloning vector)
C

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0201M14
Clone
Clone name
hba-201m14
LE_HBa0201M14
C08HBa0201M14
P201M14
Clone type
BAC
Contamination
none
Estimated length
130,982
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found