Clone Read LE_HBa0106N16_SP6_34830

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0106N16_SP6_34830
Primer
SP6
ID from Seq. Facility
LE_HBa_106_N16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
759 trimmed for vector and quality, 827 raw
Sequence
>LE_HBa0106N16_SP6_34830 (raw untrimmed)
AGGCGGCCTGGGTTTTGAAAGAGGTTTTGGAGAAAGAGGATTTTTTTTCTGGAAAAGGGTAGCAAACATGTGATATTAGATCTTTTTTGCATCGACTAAA
CACTATACACACTGATTCTATATGTTTCATCAAGCACAGTTGATGACGCAGTTATTAAACTTATTGAATGATACATTATAACAATTTTCAAAACCTCATG
ATACATAGAAAACATTATGATACACAACAAATTCATGTATCAATGCATCGTCTAAAACACTATACACACTGATTCAAAATGTATCAGCAAGCACACTTGA
TGGCGCAATTATTGAAATTAATCACTGATACATAATAAAAAATTTTCAAAAACCCTTGATACATAGGAAATCATATGATACACATCTAATTCATGTATCA
AAGCATAGACTAAACATTATAATCCACTTAGTACTTATGTATTAAACCTATTGTCTGATACATGATAATAATTTTCATAATTTTTTGATACATATTGGAT
TCCTTAAAATTTTTACTAATTTCAACAACAATTTTAAAATAAGTATAAAAATACAAACCCGAAACAATGTAGGCCTGACAACAATGTTTGCTGCTTCTTT
TTTCCTTTTTGTTATATTTTGACAATCTTTTATTTTGATGTTTCGCCAAAGTCTTTGTTTGAATCCTTCTGAAGATTCATAGGATCATGCAAAGACTTTT
TTCTATTTTCTTTCCAATTTTTCATCGTCGGAATCATATATCCTTCTATTAATTAACGGATCCATTACTATGATGTAATAGAAAAATTAACCAAAACAAA
AAAAGGAAGAAAAGAATAACTGATGAT
>LE_HBa0106N16_SP6_34830 (trimmed for quality and cloning vector)
GGATTTTTTTTCTGGAAAAGGGTAGCAAACATGTGATATTAGATCTTTTTTGCATCGACTAAACACTATACACACTGATTCTATATGTTTCATCAAGCAC
AGTTGATGACGCAGTTATTAAACTTATTGAATGATACATTATAACAATTTTCAAAACCTCATGATACATAGAAAACATTATGATACACAACAAATTCATG
TATCAATGCATCGTCTAAAACACTATACACACTGATTCAAAATGTATCAGCAAGCACACTTGATGGCGCAATTATTGAAATTAATCACTGATACATAATA
AAAAATTTTCAAAAACCCTTGATACATAGGAAATCATATGATACACATCTAATTCATGTATCAAAGCATAGACTAAACATTATAATCCACTTAGTACTTA
TGTATTAAACCTATTGTCTGATACATGATAATAATTTTCATAATTTTTTGATACATATTGGATTCCTTAAAATTTTTACTAATTTCAACAACAATTTTAA
AATAAGTATAAAAATACAAACCCGAAACAATGTAGGCCTGACAACAATGTTTGCTGCTTCTTTTTTCCTTTTTGTTATATTTTGACAATCTTTTATTTTG
ATGTTTCGCCAAAGTCTTTGTTTGAATCCTTCTGAAGATTCATAGGATCATGCAAAGACTTTTTTCTATTTTCTTTCCAATTTTTCATCGTCGGAATCAT
ATATCCTTCTATTAATTAACGGATCCATTACTATGATGTAATAGAAAAATTAACCAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.90868
Expected error %
0.184954
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0106N16
Clone
Clone name
hba-106n16
LE_HBa0106N16
P106N16
Clone type
BAC
Contamination
none
Estimated length
97,186
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found