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Clone Read LE_HBa0106J01_SP6_34608

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0106J01_SP6_34608
Primer
SP6
ID from Seq. Facility
LE_HBa_106_J01-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
574 trimmed for vector and quality, 793 raw
Sequence
>LE_HBa0106J01_SP6_34608 (raw untrimmed)
GGGGCCATGCTTTTGAACTGAAAGTTCTTTGTTGTTTCACAAAGGGCATCTATTCCTTCTTTGTAAGACGTATTGCCCTTAACCACTTTGATCCTGTATT
GTTTTGGATGGTATGACCTTAACCTAGATAGTTGATATGATTGTTCACTACATAACATACTGTTGGCTACTTTTTTTCGTTCTCCTTTTGAGTCAAGAAA
CAACCTCCTCTGTACCTTCTTCGACTTTACCTATTGAATACGTTATTATTGGCCATAGTAAGTGTTTACGTTGTGCTTTGTAGACATATATTGCTCTTGG
AATATGATTCACTATTTGTTTCTTAATCTCTTGGATAGGACAAGTATTGTGCTTGTTTCCTTAAGGAAGAAGTTAAGTTCATAAAAAAGAGGTATTTGTT
TGAGTTGTCCAAAGTTGCAAATTGAATAATGAATACATCATTTAATTAGTTTGTAGTACTAGGTTAAAAGTATGTACCTTTTTTCATCTCAATCCAATTT
TTTCTTCTCTTATTATTATTATTATATATATAGTAGGAATAATGTAGAAGAAAGTCTACTAAATGACGTTCAAAAAAAGGTTTCTATTTTTTGGGAAACC
AAAAAGAAGCATACAATTGGATCAACTTGTGTAGAATGAGAACAAAAAAAAGTAATTTAACGTAAACGTTAAAACCCCACCGTTGGAGTCTTACATAAAA
ATAAATTATTTTTTTTTAAAAAATTAAATCTTGTTACTACAAGTCCCAGAATTATATTTCATTCGTTCTATTTTTTTCATTTTCGACGTTGCC
>LE_HBa0106J01_SP6_34608 (trimmed for quality and cloning vector)
TTGTTGTTTCACAAAGGGCATCTATTCCTTCTTTGTAAGACGTATTGCCCTTAACCACTTTGATCCTGTATTGTTTTGGATGGTATGACCTTAACCTAGA
TAGTTGATATGATTGTTCACTACATAACATACTGTTGGCTACTTTTTTTCGTTCTCCTTTTGAGTCAAGAAACAACCTCCTCTGTACCTTCTTCGACTTT
ACCTATTGAATACGTTATTATTGGCCATAGTAAGTGTTTACGTTGTGCTTTGTAGACATATATTGCTCTTGGAATATGATTCACTATTTGTTTCTTAATC
TCTTGGATAGGACAAGTATTGTGCTTGTTTCCTTAAGGAAGAAGTTAAGTTCATAAAAAAGAGGTATTTGTTTGAGTTGTCCAAAGTTGCAAATTGAATA
ATGAATACATCATTTAATTAGTTTGTAGTACTAGGTTAAAAGTATGTACCTTTTTTCATCTCAATCCAATTTTTTCTTCTCTTATTATTATTATTATATA
TATAGTAGGAATAATGTAGAAGAAAGTCTACTAAATGACGTTCAAAAAAAGGTTTCTATTTTTTGGGAAACCAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.926832
Expected error %
0.697669
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0106J01
Clone
Clone name
hba-106j1
LE_HBa0106J01
P106J01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found