Clone Read LE_HBa0104H05_SP6_33752

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0104H05_SP6_33752
Primer
SP6
ID from Seq. Facility
LE_HBa_104_H05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
626 trimmed for vector and quality, 886 raw
Genbank Accession
Sequence
>LE_HBa0104H05_SP6_33752 (raw untrimmed)
GCGGCGATGTCCTGTTCATACTATCATATGTCCATATCATTCATACATGTGTAAAGTAAGGGACACAAGTCTACCCAAATAAGAGACAAGATACTTTACT
TTATAGGGAAAATTACTTGGGATGGCAAACATCCTAAGTAATTATATTATAAGGGTATACTTTAATTTATTTACATTCTATAATTATAGGTTTTTTTTTG
CTATAATTGATGGGGTACCATCTATTTCTTAATCAATCGAATAAAAACTTTTTTTTATTTTGTATATAATTTTGTACAAATCAATATTATCTCTCCTATT
CATATTTCACCTTTTTCTCCTATAATCAATACTTCTATCCAATTATAAATTTCAAATTGGCAAGAATATAATTTATCCCTCCCGAAATTGAATTCAACTT
TCGCTGGTAATCCTAAAATTTAATCGTGTAAGTTTTTTTTCCTTATTCAACAACTATATATATATTGTGTTTCTTACCTTTTTTCATATTTTTTTGGTGA
AATAATCTATTGTTCTTATTAGATTACAAATTCTTCAAAATTAGAATGAACGAATCATCTTCATCTATGTGGATTACCAGAGATATTCCATTGCAGGTCA
ATTTTGTTGAAAATTTATCCTCTTTTTCAATGGGTTTAACTCAAGATTTTGGGGTTGATGTAGGGGCTATGGTAAATCCCGACATGTTCAACATGAACAA
ACAATGGAAGAATTGACTTCAAAGAAAAATATGACCGTCCTCACTTAAAAAGCTCTGACAATGTCAAAGCTCAAGTATAAAATCGACAAGGAGGAAGGAA
AAAGAAAGAGTAACACTGATTGAAAAAAGTTGACTGAAATGGGCGAACTGGGGACGCTTAACTCGGGGGAGGGACAGAACCGGATA
>LE_HBa0104H05_SP6_33752 (trimmed for quality and cloning vector)
ATCATTCATACATGTGTAAAGTAAGGGACACAAGTCTACCCAAATAAGAGACAAGATACTTTACTTTATAGGGAAAATTACTTGGGATGGCAAACATCCT
AAGTAATTATATTATAAGGGTATACTTTAATTTATTTACATTCTATAATTATAGGTTTTTTTTTGCTATAATTGATGGGGTACCATCTATTTCTTAATCA
ATCGAATAAAAACTTTTTTTTATTTTGTATATAATTTTGTACAAATCAATATTATCTCTCCTATTCATATTTCACCTTTTTCTCCTATAATCAATACTTC
TATCCAATTATAAATTTCAAATTGGCAAGAATATAATTTATCCCTCCCGAAATTGAATTCAACTTTCGCTGGTAATCCTAAAATTTAATCGTGTAAGTTT
TTTTTCCTTATTCAACAACTATATATATATTGTGTTTCTTACCTTTTTTCATATTTTTTTGGTGAAATAATCTATTGTTCTTATTAGATTACAAATTCTT
CAAAATTAGAATGAACGAATCATCTTCATCTATGTGGATTACCAGAGATATTCCATTGCAGGTCAATTTTGTTGAAAATTTATCCTCTTTTTCAATGGGT
TTAACTCAAGATTTTGGGGTTGATGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.894587
Expected error %
0.099624
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0104H05
Clone
Clone name
hba-104h5
LE_HBa0104H05
P104H05
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found