Clone Read LE_HBa0104A16_T7_33439

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0104A16_T7_33439
Primer
T7
ID from Seq. Facility
LE_HBa_104_A16-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
494 trimmed for vector and quality, 917 raw
Genbank Accession
DU088754
Sequence
>LE_HBa0104A16_T7_33439 (raw untrimmed)
ATAAGCTCCGGTCCCCGGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCAAGATTGAGGTCTCAAATTTCCACATATTGCCCTTAGCTCCAG
TTTCTTCATTTATTTGGAATCAGTTTTATATAAGATGATTTTGAAAGAAAAAAAAAGACATGACCAGCCAGCTTTGTCACTAAATTTGACACTGAACTTT
AAATTACCCAGTTCTTCATATTGTTACTGGAAATACGTGCATGTACAAACTAAAAGCAGCCAATGTAATATTCAACTGCCCATCCACCAACATTTTGTTT
TCCTCATTAGTTCTCTCTTGCTACTTGTCACAAAATTTCTGGGAGAGTATCTGAAGAGATATTAAAGCTGAAGAAATAGCAAAGATAAGAAAACTATATC
CTTTGTGGAGGAATTTTACAAACAATGCGGTGTCTTATACTTGAATCTTCTTTCTGGTTTTATTACTGCTAGCAGCAAAAGACGCGGATTTCAGTCCTCC
AAATCAGTCCTCTAATATATGAAGATCTTTTCTTGACCAGGCTTGCTCCAGTTATTGCCTTCCCGCGTGTGTCTCTTCCCACCCCGCAAACGATCCGCTT
TCCCGATACCAGGGGACCACATGATATCCGTTGCACTTGGAATATGGATTCTACCGTAACACTCTCCCTCCTCTTCAGATAACTCACCTACTACTTGCAA
TACACAGACCCATCCTAAGTCTGTGCTTGGGTGGCTCGATACTATCCTCCCCCGACGCTCACGTCTCTTTACCGCATTCTCTCTTTTATTTAGTTTGTCG
TGCTCTGGTTTTCTCGCTATGCGGGTGGGTCTCCCTTGGGGACCTCATCTCTATTTCTCCTCCTCCCTCTCCCCCCCCCCTACTCTCCTGCACTGTCCTG
CCTCTCCATACCAGCAC
>LE_HBa0104A16_T7_33439 (trimmed for quality and cloning vector)
AGCTTCAAGATTGAGGTCTCAAATTTCCACATATTGCCCTTAGCTCCAGTTTCTTCATTTATTTGGAATCAGTTTTATATAAGATGATTTTGAAAGAAAA
AAAAAGACATGACCAGCCAGCTTTGTCACTAAATTTGACACTGAACTTTAAATTACCCAGTTCTTCATATTGTTACTGGAAATACGTGCATGTACAAACT
AAAAGCAGCCAATGTAATATTCAACTGCCCATCCACCAACATTTTGTTTTCCTCATTAGTTCTCTCTTGCTACTTGTCACAAAATTTCTGGGAGAGTATC
TGAAGAGATATTAAAGCTGAAGAAATAGCAAAGATAAGAAAACTATATCCTTTGTGGAGGAATTTTACAAACAATGCGGTGTCTTATACTTGAATCTTCT
TTCTGGTTTTATTACTGCTAGCAGCAAAAGACGCGGATTTCAGTCCTCCAAATCAGTCCTCTAATATATGAAGATCTTTTCTTGACCAGGCTTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.945898
Expected error %
0.28481
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0104A16
Clone
Clone name
hba-104a16
LE_HBa0104A16
P104A16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found