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Clone Read LE_HBa0100M04_SP6_32454

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0100M04_SP6_32454
Primer
SP6
ID from Seq. Facility
LE_HBa_100_M04-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
625 trimmed for vector and quality, 873 raw
Genbank Accession
DU088031
Sequence
>LE_HBa0100M04_SP6_32454 (raw untrimmed)
CCCAGCCTTTGTGTCTCATCTTTGTACTTCATTTGTGATTGCTTGTGTTTAGTGATGATGTTAAATGGAAGTATACCCTTTGCTGCGATAGAATAGGGTT
TGTATGATGTTTAATTTGAATATCTTGAATTATCACTTTTGAGTTGTTGTCTAGGATTTAATGTCATAAGGGTCGTGATGAATTTTCATATGTGCCTTAT
CATAATGTTATGATGTAAATGGTCAAACCTCACATGTTTGAATTGTAATGAAAGGACAATACTCATGGGATTCCTGTTGAGCTATGATGATTACTATATA
AGGGTACACCCTATAACCTAAACTGATGATTATTAATAAAATCCATTTCAAAAGGGGACTCTAGCTGAGCACCGAGTGAAGTAGAAGTGAGGAGCATCCC
TTACGACATACGTAAGGTAGGATAAATTTTGTACTCATGATATTGGAGACTATAATGCGTGTGCTTAAAGAGAGTCCCACCTGCATCTACTAGATCTTGA
AATATGTTTCACCTATAGGAATACTAGCTAGTGGATCCACATAGTTGTTAAGTTCATGTTTTGATACTACCTTGGCAAGTAGTCCACCTTTTTTCGGTGA
AGGGTTCCATGATATCAGATTCCACATTAGCTCATGTGGTATATGTCTGTTAATACAAGATGTTCCCTAAAGGTAATATGAAATCATAAACTTAACTCTA
ACTAGTATGACCTACCGGGTTTGGCTTTTGTCAAGAAAGGGGGTATGAAACTCTGCCTATAACATTGCACTAGTTATCCTTGATGGAATCCTGGTAAGGA
GTTCTTCTGTTCAAAATACTCAAAAATATAATAATTTGAATAGTTGATCTTCCTGGTAACTCACTCTTTCCAT
>LE_HBa0100M04_SP6_32454 (trimmed for quality and cloning vector)
ATTTGTGATTGCTTGTGTTTAGTGATGATGTTAAATGGAAGTATACCCTTTGCTGCGATAGAATAGGGTTTGTATGATGTTTAATTTGAATATCTTGAAT
TATCACTTTTGAGTTGTTGTCTAGGATTTAATGTCATAAGGGTCGTGATGAATTTTCATATGTGCCTTATCATAATGTTATGATGTAAATGGTCAAACCT
CACATGTTTGAATTGTAATGAAAGGACAATACTCATGGGATTCCTGTTGAGCTATGATGATTACTATATAAGGGTACACCCTATAACCTAAACTGATGAT
TATTAATAAAATCCATTTCAAAAGGGGACTCTAGCTGAGCACCGAGTGAAGTAGAAGTGAGGAGCATCCCTTACGACATACGTAAGGTAGGATAAATTTT
GTACTCATGATATTGGAGACTATAATGCGTGTGCTTAAAGAGAGTCCCACCTGCATCTACTAGATCTTGAAATATGTTTCACCTATAGGAATACTAGCTA
GTGGATCCACATAGTTGTTAAGTTCATGTTTTGATACTACCTTGGCAAGTAGTCCACCTTTTTTCGGTGAAGGGTTCCATGATATCAGATTCCACATTAG
CTCATGTGGTATATGTCTGTTAATA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.95608
Expected error %
0.110866
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0100M04
Clone
Clone name
hba-100m4
LE_HBa0100M04
P100M04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found