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Clone Read LE_HBa0100C01_T7_31969

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0100C01_T7_31969
Primer
T7
ID from Seq. Facility
LE_HBa_100_C01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
564 trimmed for vector and quality, 897 raw
Sequence
>LE_HBa0100C01_T7_31969 (raw untrimmed)
ATACAGCCTGGACCGGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGGAGATCGCCGGTTTCGAATCTTTTTATTGACATAACCGTTCTTTCG
GGCACTGGCTAGTTTTTTCTCGAGACTACGAGGCTTCGATTAATCGTGATTGGCTTTTCCGATTGGCTTAGGACTTGCTTGATTTTCTTTTTAGCTTTTG
TTGAGATTAGTTGGTGATGTTATTTAGTTGGGGAACACGTCCTCCTGTGTGAGAAAGTTGTGCGCTGTCGATTCCTCATATCTTGCGAACAGGAAGCATA
AAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACGTTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCACCGGC
CTTAATGAATCGGCCAACGCGAACCCCTTGAGGCCGCCCGGGCCGTCGACCAATTCTCATGTTTGACAGCTTATCATCGAATTTCTGCCATTCGTCCGCT
TATTATCACTTATCCAGGCGTAGCAACCATGCGTTTAAGGGCACCAATAACTGCCTTAAAAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTG
TAAATTCATTAAGCGATTCTGCCAACTTGTGAAGCCATCACTACACGGTTGCTCGAACTTGTTTTGCCAATTGCATCAGGTACGTTGGGGACTTGTCTTA
TAATACTTGACTATGGGAGAAACGGGTGTAGAAGAACATGTACTTTTTGCGCACGCTTCCCCTCACGTTCGGTAGAAAATCATCCGAGGGTTTGGCGGAG
ACGTAAAAATGGAGTTTCGTAAAACTCCCCCCCCGCCCCCCCCTGGGATTTTCGAATTTTGAGGAAAGTATAGGAAAGAATAGTTAGAAATGTTTGA
>LE_HBa0100C01_T7_31969 (trimmed for quality and cloning vector)
AGCTTGGAGATCGCCGGTTTCGAATCTTTTTATTGACATAACCGTTCTTTCGGGCACTGGCTAGTTTTTTCTCGAGACTACGAGGCTTCGATTAATCGTG
ATTGGCTTTTCCGATTGGCTTAGGACTTGCTTGATTTTCTTTTTAGCTTTTGTTGAGATTAGTTGGTGATGTTATTTAGTTGGGGAACACGTCCTCCTGT
GTGAGAAAGTTGTGCGCTGTCGATTCCTCATATCTTGCGAACAGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACGTTAATT
GCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCACCGGCCTTAATGAATCGGCCAACGCGAACCCCTTGAGGCCGCCCGGGCCGTCG
ACCAATTCTCATGTTTGACAGCTTATCATCGAATTTCTGCCATTCGTCCGCTTATTATCACTTATCCAGGCGTAGCAACCATGCGTTTAAGGGCACCAAT
AACTGCCTTAAAAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAATTCATTAA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Probable foreign DNA contamination
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.97758
Expected error %
4.2986
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0100C01
Clone
Clone name
hba-100c1
LE_HBa0100C01
P100C01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found