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Clone Read LE_HBa0099F14_SP6_31370

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0099F14_SP6_31370
Primer
SP6
ID from Seq. Facility
LE_HBa_099_F14-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
736 trimmed for vector and quality, 907 raw
Sequence
>LE_HBa0099F14_SP6_31370 (raw untrimmed)
CCGCCGGCAGCCTTAAGAGATCTGAAGTTCCCAAGGTATTGAAACTAAAGAGTTAGAAGGGTGACATGCCTATAGAAGTTTGATCTTGACTTGTGACTCG
ACCTGTAGAGCAGATACAACTTTTGAAGTTTGTCCCCTGAAGCAAATATACACTTCCTTTTCCTTTTTGTTTCCCTGACTTTCTGTCATTATGTTGCATT
CTTTTAGGTCTTACTTAGTCATGGTCATAGTCAAACTAAAATTAACTACTTCCTCTTATTCTATGATTCCAGAGGCGGCGAACAGCAGTTGATGAACTCA
ATATGCGAAGCATATTTGTGGAGAATGATGTCATCTGTGTAAGCTCCCCAGCTCCTTTGACTATTTATCAAATTCTTGAAGGGACCATTCTATGTGTGGC
ATCCATCTGTGGATTATGACGAATGCAATTATGTCTCGTCTGTCCTTACTGATTATATGTGCATGTCATTCTCCTTTTATTTTATTTTATTTTCTGCAAG
TATGGTAATCTAAGCGAAATTGTCCATCTTCAGGCTGAAGTCCGTGGTTTCCAACATGATGGGAGTCTACACCTCCAAGCTCGAAGCCAAAAGTATGGAA
AGGTGTGTTTTCATAATTGAAATTAGAACACTAAATTTTGTTTCAGAGTTATNNNNNNNATTATCAGGTTGGAAATAAGCACCTCATTTTCTCACCTTTT
CCTCCTCCTACCTGTTTGACCATAAAAGCTTTGTGTGGGAGTAGGACTGGGATTCAAATTCAATCTCCCACAAGGTGGGGGATATACATTTCTAGCATTT
CCAAGAGATTTTAGGTAGATGATTTTATGGTAAATTAAACCAGGGACTAAACTTTCCCATTTAAAAACCTAAAAACATTTGCATACAGCTGGGATGGAGT
TTGCTTC
>LE_HBa0099F14_SP6_31370 (trimmed for quality and cloning vector)
AGGTATTGAAACTAAAGAGTTAGAAGGGTGACATGCCTATAGAAGTTTGATCTTGACTTGTGACTCGACCTGTAGAGCAGATACAACTTTTGAAGTTTGT
CCCCTGAAGCAAATATACACTTCCTTTTCCTTTTTGTTTCCCTGACTTTCTGTCATTATGTTGCATTCTTTTAGGTCTTACTTAGTCATGGTCATAGTCA
AACTAAAATTAACTACTTCCTCTTATTCTATGATTCCAGAGGCGGCGAACAGCAGTTGATGAACTCAATATGCGAAGCATATTTGTGGAGAATGATGTCA
TCTGTGTAAGCTCCCCAGCTCCTTTGACTATTTATCAAATTCTTGAAGGGACCATTCTATGTGTGGCATCCATCTGTGGATTATGACGAATGCAATTATG
TCTCGTCTGTCCTTACTGATTATATGTGCATGTCATTCTCCTTTTATTTTATTTTATTTTCTGCAAGTATGGTAATCTAAGCGAAATTGTCCATCTTCAG
GCTGAAGTCCGTGGTTTCCAACATGATGGGAGTCTACACCTCCAAGCTCGAAGCCAAAAGTATGGAAAGGTGTGTTTTCATAATTGAAATTAGAACACTA
AATTTTGTTTCAGAGTTATNNNNNNNATTATCAGGTTGGAAATAAGCACCTCATTTTCTCACCTTTTCCTCCTCCTACCTGTTTGACCATAAAAGCTTTG
TGTGGGAGTAGGACTGGGATTCAAATTCAATCTCCC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.976696
Expected error %
1.59136
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0099F14
Clone
Clone name
hba-99f14
LE_HBa0099F14
C09HBa0099F14
P099F14
Clone type
BAC
Contamination
none
Estimated length
102,884
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found