Clone Read LE_HBa0175E06_SP6_302193

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0175E06_SP6_302193
Primer
SP6
ID from Seq. Facility
LE_HBa_175_E06-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
343 trimmed for vector and quality, 1016 raw
Genbank Accession
DU090355
Sequence
>LE_HBa0175E06_SP6_302193 (raw untrimmed)
GCGCTAGGAGCTTAAATCCTGGTAATGCTCGTACATTCTACGTACTGAGCCATTTGGTCTGCATCTTCTCATGATGCAGACACAGGTATTCAGGATCATC
AACAGGAGCTTCATTGATACATCCGAGAGTTTGAGTTAGCTATGATGGACCTCCTTGCTTCCGGAGGATTTCATTTACATTAAATTTGTATCAGTTTTTA
GGATGTCATGAGTCTTGTCCTGAATTCCATCTTCATCAATTAGAAGTTTCATAGATAGTCACTATTGTTGAGAAGTCTCTATCTTTTATTTATCAAATGT
GTTAAAGACTTAAGTTGTGTATTTTATGGCGAGTTGAATATATAAATTTGATTCAAAGTTAATCTTTTAAGTTAAAGAATTGCATTGAGTTATTGATTTC
TTATCAGTTGATAAGCTTTTGCATGCTCACGATTAGTCTTCCACTTGTCGTTAGTCAGAATGAGAGGTTCTCAAGTGAACCATCAATAATTCTTGGCTGT
TAGACAATTTCGATGTAATGACTGTGTACCTTATCTATATTTTTCTACCTCCGTTCAATAGAAGTTGTATTCTGATTACTTGTTTACTATCTGCCCTCTT
GGATCTACTATGTTCGGGGAAGAAATCTTTTACTCTATTATTTAACTGTATTTCTGCTTATTGAATTGTTATCCAAGTGATTTTTGACATTTTTTTTCTT
TTACTTGTAGCGTTTCTCGTTTTACTGAGTTCTGCAGTGGTGTCTTGTTACAAGATATATATTTTGACGATTCATTGCTACTTTTCTATTTTCTTCGCTC
ATCAGAGATTTTGCCTGCCGATCTGCATTGTTTTAGCTCTCCTTTTTAGAGGTTTACTTAAAATTATTGTAATAATATTATATATGGTGTTTATAAGGAT
CTTTTTGTATTTAGTACTTTTCCATTTTTCACTCTTTCTCATACATTTATTTTTCATTTTTTTGGAAAGATAGTGTGTTAGTCAAGTTAGAATACTGTTA
GTGCTTGATATTTGGC
>LE_HBa0175E06_SP6_302193 (trimmed for quality and cloning vector)
TACATTCTACGTACTGAGCCATTTGGTCTGCATCTTCTCATGATGCAGACACAGGTATTCAGGATCATCAACAGGAGCTTCATTGATACATCCGAGAGTT
TGAGTTAGCTATGATGGACCTCCTTGCTTCCGGAGGATTTCATTTACATTAAATTTGTATCAGTTTTTAGGATGTCATGAGTCTTGTCCTGAATTCCATC
TTCATCAATTAGAAGTTTCATAGATAGTCACTATTGTTGAGAAGTCTCTATCTTTTATTTATCAAATGTGTTAAAGACTTAAGTTGTGTATTTTATGGCG
AGTTGAATATATAAATTTGATTCAAAGTTAATCTTTTAAGTTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.922565
Expected error %
0.328219
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0175E06
Clone
Clone name
hba-175e6
LE_HBa0175E06
P175E06
Clone type
BAC
Contamination
none
Estimated length
85,809
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found