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Clone Read LE_HBa0107K08_SP6_299848

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0107K08_SP6_299848
Primer
SP6
ID from Seq. Facility
LE_HBa_107_K08-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
655 trimmed for vector and quality, 870 raw
Genbank Accession
DU090176
Sequence
>LE_HBa0107K08_SP6_299848 (raw untrimmed)
NNNAAGTTTANCTATGATTATTGATAATATTACTAGTAGAATTTTTTTGGGCAAATTCCAGCTAGCTGTACCCCTTTAGTTTTGATTGAAGATGTGCTGA
CCAATAGATTTTTGTCATAACAAAACCTAAAATATTTGTTGAAAGAGAGAGGAACCTAACAAATTTATATTTCTTTTTATATATATATAACCCAACCAAA
GCAAAAGAGAGAAAAATGAAAAATATAAAATTGTTACCTATTAAACATGTTGCTATTAAATTACCCTTTTAAAACGTGTAAAAGAACTGTCACCATCTCT
TCGTTCATGTAGACGCACTTTCATTAACCAAAAGAACACCTTATGATATTAAATTTCATGTTCCTTTTTATTTGTTTTGAAATTATTTGACACATATAAT
ATCGATGGTCTCATTCAGAAATTATTATGCTATATTTTTTTCCTTCATATAATGTAATTTTAAAAGAAGGAAGTTCAATTGATGTGCTTCGATTTGTGTC
AAAATTTATCTTTAGAAGCAATTAATTAACGATAATAATTTGATTGTCGCTAGATGTGTATATTTTGTTATAATTAACACTATTTATATATATCCTACAA
TCTTTTGATATTGAATCTAATGACAACTAATACCGATAAAGAATTAGGACTCTAGTCAACCCAAGCCAAAAGAACCACCATAGCCATTTCAAGAGGTTTT
TACTTGACAAATTCCAAAATTAAGAAAACCTAATAAAATATTTTAAACCTCTTTAGACACCAACCCGGACCAAATAAATTAAATTAAGAAAAGGATGATG
AAAAAGGAAAAAAGCCCCCCTAGTTACCAAATTTTCAATAAATCCAATATTTCGAAAATGAAGGATTCTG
>LE_HBa0107K08_SP6_299848 (trimmed for quality and cloning vector)
ATATTACTAGTAGAATTTTTTTGGGCAAATTCCAGCTAGCTGTACCCCTTTAGTTTTGATTGAAGATGTGCTGACCAATAGATTTTTGTCATAACAAAAC
CTAAAATATTTGTTGAAAGAGAGAGGAACCTAACAAATTTATATTTCTTTTTATATATATATAACCCAACCAAAGCAAAAGAGAGAAAAATGAAAAATAT
AAAATTGTTACCTATTAAACATGTTGCTATTAAATTACCCTTTTAAAACGTGTAAAAGAACTGTCACCATCTCTTCGTTCATGTAGACGCACTTTCATTA
ACCAAAAGAACACCTTATGATATTAAATTTCATGTTCCTTTTTATTTGTTTTGAAATTATTTGACACATATAATATCGATGGTCTCATTCAGAAATTATT
ATGCTATATTTTTTTCCTTCATATAATGTAATTTTAAAAGAAGGAAGTTCAATTGATGTGCTTCGATTTGTGTCAAAATTTATCTTTAGAAGCAATTAAT
TAACGATAATAATTTGATTGTCGCTAGATGTGTATATTTTGTTATAATTAACACTATTTATATATATCCTACAATCTTTTGATATTGAATCTAATGACAA
CTAATACCGATAAAGAATTAGGACTCTAGTCAACCCAAGCCAAAAGAACCACCAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.909221
Expected error %
0.0595763
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0107K08
Clone
Clone name
hba-107k8
LE_HBa0107K08
P107K08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found