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Clone Read LE_HBa0001G05_SP6_297

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0001G05_SP6_297
Primer
SP6
ID from Seq. Facility
Le-HBa001_G05-SP6.ab1
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
661 trimmed for vector and quality, 1259 raw
Genbank Accession
DU020815
Sequence
>LE_HBa0001G05_SP6_297 (raw untrimmed)
CCCTATTCGCAGGTTTGTATTTCTGACTTTACTTGTAATTGTTCTACTTGCTTGTATTTGATTTGCTTAAAATTTTATCCCTCTTGTAATGAACTAGGTG
TGACCTGAATTCTCAACATTTAAATATGTAGGCGGCCTATGTCGGTATCGGTTGGTTTCTCTGTAAAATTTCTTATGTCATTAGCCTTTGTGGTGGAACT
ACGTTCGACCTGATTCCTACCTCAAGGGGATACATAGGCGCCACACAGGTTCGGTCATATTTCCCGTAAGATTTGTATTCCTCTTTACAATAGAAGCTGG
ATAGAATTTTTGAGAGGGTCTCAAAAATTCTCAAGAAGAAGATATTTTCCTCAGCAAGTCAAGATCGAAAAGACTTCGAGATTTGCAACTGGGAATGAAT
TTTCGAGAAGATCTCAAAAATTCCATGATTTAATTACCGACAGTTGAAGATAAGACATAACTTGTAACTGGGACAAAATTTTGAGGATGGCCTCAAAATT
TCAAACATGGTATCAAAATTCTGGATTGACTCTGAATCCTCCCCCAACGAATAATGGGAAGTCAAGGGGGTAGAAAGCTCTTCCCCAAAATCTATGATTT
TTCTGCGGATGCAGAAATTATTTATATTGCATATATCGAAGATTTGGGAATGCGAATAGTTTATTTCATTCAATTCTCAACAACCCGAAGTCTGTAAGGA
GTATCTAGCTAGGTTCAAAGATCAACCAAATGAAATCCCCCGGAAAGAATAGTTTATGATTTTTGTCAAAAGACTTCATCCTGCATCATATTATCATATA
TTGATTTTATAGACTACCCGGAGGGGTCATTTTGTTTATTTGTCAACAAAGACATTACACTAACCCAAAGGGGCCGTTTTTTTTTATTGTCGATTAAAAC
AATACCTGCTCATGGAAAATTCTTTTTTTTCTTTTGTCCATCGCGGAAATTCCCCTTTTCGAATATTTCTTTTTTTTTGTTTTTTCTTCTGATCCAACAT
TGAATCTACCAAAATGGGCCCCCCTAATATTCTCCTTCTTTGTCTCCATTTTTTACACTCCTTTCTTTTTTTTCGTACCCCAAAAAATAAGCTCAAACAA
AGAAAAACCTGGGTGCTCTCCAGAAAGAACTTTGTCTCTCACAGGGCTAATACTATCCCTGCCCCGCTGGAAGTCAAATTATTATGACTAGAATGTAAGA
AAAATCTACTCAACTCCTCACCAGAATATCTTCCGCGTCCCGCGCTGGCAGCAGAAATT
>LE_HBa0001G05_SP6_297 (trimmed for quality and cloning vector)
TTTCTGACTTTACTTGTAATTGTTCTACTTGCTTGTATTTGATTTGCTTAAAATTTTATCCCTCTTGTAATGAACTAGGTGTGACCTGAATTCTCAACAT
TTAAATATGTAGGCGGCCTATGTCGGTATCGGTTGGTTTCTCTGTAAAATTTCTTATGTCATTAGCCTTTGTGGTGGAACTACGTTCGACCTGATTCCTA
CCTCAAGGGGATACATAGGCGCCACACAGGTTCGGTCATATTTCCCGTAAGATTTGTATTCCTCTTTACAATAGAAGCTGGATAGAATTTTTGAGAGGGT
CTCAAAAATTCTCAAGAAGAAGATATTTTCCTCAGCAAGTCAAGATCGAAAAGACTTCGAGATTTGCAACTGGGAATGAATTTTCGAGAAGATCTCAAAA
ATTCCATGATTTAATTACCGACAGTTGAAGATAAGACATAACTTGTAACTGGGACAAAATTTTGAGGATGGCCTCAAAATTTCAAACATGGTATCAAAAT
TCTGGATTGACTCTGAATCCTCCCCCAACGAATAATGGGAAGTCAAGGGGGTAGAAAGCTCTTCCCCAAAATCTATGATTTTTCTGCGGATGCAGAAATT
ATTTATATTGCATATATCGAAGATTTGGGAATGCGAATAGTTTATTTCATTCAATTCTCAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.959886
Expected error %
0.402625
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0001G05
Clone
Clone name
hba-1g5
LE_HBa0001G05
C12HBa0001G05
P001G05
Clone type
BAC
Contamination
none
Estimated length
115,053
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
3 sequencing reads found