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Clone Read LE_HBa0006N17_SP6_2960

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0006N17_SP6_2960
Primer
SP6
ID from Seq. Facility
LE_HBa_006_N17-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
310 trimmed for vector and quality, 1002 raw
Genbank Accession
DU023121
Sequence
>LE_HBa0006N17_SP6_2960 (raw untrimmed)
AAAAAAAAAAGGGTTTTCNCCCGCTATCGNATCATTAAAATAAAAAACTGAAGTGATTCAAAGAATTACCTCTTGAATATTTTGAATTATCCATTAAAAG
AGAAAAGATTTGAAAATTAAAAAATGCATTAATGGAGGTAACAGTGGAGACTTGGGAGATTTATCGCATGGAAAAATAATAATATTGAGTATGAGATTTC
AAATTGATGTATCCAAAAAGGAAATGAGTGAGTAGAATAAGACATTTTTTATATTTTTTAAACAGTAGAAAAAGTTTAAAAAATATGATAAAAAATGGTG
CTTAGTTAGGTAATATTTTTTTTTAAAAAAAAAAGGGGGGGGGGGGGGGAGGNACCACNTGNAAACACTTCCAAACTAAGGCCAACGCACAACAATGGGA
AATTACAAAGTGAGAAAAATATCATTTCATTGTCAACTAATCTGTTGTAGAGTCTGTTAGAACTGAAAAATTCAATTTTAGATTCAGTAAGATGTGCAAT
AAACATTATGATACCACAGGTACTTGAGAATAGGGTTTGAATCTACTAATCTACTTTTTAAATCATATTGGTACTACTATATCGACTTTGTATGAACATA
AGGGGTTTTGGTATATTTACTTTTTTAATGATCAAGTACAATATATCAATGAGTAAAGACAGTACTAGATCCCCGTTCAATTTACTTACCTCCTCTTGAC
CGTCGAGCTACAAATATTATGAATGCTGTATCATTGTTTTGGTTGTGCAATTGTTTCCGAACAGACGCCCTTTCCAGTTTGCTTCCTGTTTTTTAAATTA
AATCACCAATCCCTCGAAAATAATGTCGGTATCCCGGTGGAATTTGAAAGTTCTTCTCTTCCATAGAAAAGGTTAGGGAATATGGAGGGAAGGAATCATT
TTTGGTTTTTCGTTTTGTATATGTGTCGAGGTTTAGTCTAACTATTTTTCTTCTTTACATTTCCATTTCGCTAATCCGTTTAATCCTCACTCTGCCATTC
TA
>LE_HBa0006N17_SP6_2960 (trimmed for quality and cloning vector)
ATAAAAAACTGAAGTGATTCAAAGAATTACCTCTTGAATATTTTGAATTATCCATTAAAAGAGAAAAGATTTGAAAATTAAAAAATGCATTAATGGAGGT
AACAGTGGAGACTTGGGAGATTTATCGCATGGAAAAATAATAATATTGAGTATGAGATTTCAAATTGATGTATCCAAAAAGGAAATGAGTGAGTAGAATA
AGACATTTTTTATATTTTTTAAACAGTAGAAAAAGTTTAAAAAATATGATAAAAAATGGTGCTTAGTTAGGTAATATTTTTTTTTAAAAAAAAAAGGGGG
GGGGGGGGGG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.857162
Expected error %
0.221435
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0006N17
Clone
Clone name
hba-6n17
LE_HBa0006N17
P006N17
Clone type
BAC
Contamination
none
Estimated length
45,832
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found