Clone Read LE_HBa0096N06_T7_29435

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0096N06_T7_29435
Primer
T7
ID from Seq. Facility
LE_HBa_096_N06-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 921 raw
Sequence
>LE_HBa0096N06_T7_29435 (raw untrimmed)
CGATTTTTAACAAATTCTTGTTCTTGATCATGCTGATGAGCGCATACCCTCACCATGTACCGATANTGACGCTTCCGCTCNGAGATCCGATTCCTACGGT
TCANGCTCCCCGTTCACATACATGACAATACATTCGACTGGATAGGATACAACAACCGTCTCGTTNGTTATTTCCTCTNGAAACAATATTGACTATTTAG
TTGCGTCCTCGTTTCTCTTTATACCATCATTGGGTTTATGTACTTTCGTTTACCTACATATTGGATAGTCTATGTATTTATCACTTCTCTTACGAAATGT
ATATACTTTCGCTCAATGCTCGTACTTTCATATTATTATCGCTCTTTCCCTCCTGCTGATTACTCGTTCTTTCAGCTTGTTAGAATCGTAACTACTCAAA
ATTACTTTCATGACCTATTCATACACTAGGCTGATCACTGTACATTCGCTT
AATTATTAACTAGCTATTTTTCATACTCTTCACACTACACAAATCTATT
ACAATGCGCACTGCCGCTTCTATCTTACTATCAACGTAAATTGATATTCTAAACATTCTAGTACTAGAGTATATATATTACCTCTTCTCCACACAACCAT
AGAATTCTTCTCAGATCTATCTCTCTTCACTATCCACATACTATACCATTAGATTTGTGTTGTGTTCCTCTTATGAGAACACAGAGTGGTCACAAACTAC
CCTAGTAAANGTATGCGATAGCAATCTGAAATATGAATTGTACTCTGTAACATATCTTAATGCTATAGATGTATATTCTTATTCCATTATCTCACTGATC
CTAATCATTTATGTTCTATTACTTGTCTTGAATTTTCACATCCTATCCATGTTCTCTATTCACACCACAATTCGACATATTCCTGATGCCGCTACATAAA
TCGCTTACCTATGAACTTAAT
>LE_HBa0096N06_T7_29435 (trimmed for quality and cloning vector)
AA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.53748
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0096N06
Clone
Clone name
hba-96n6
LE_HBa0096N06
P096N06
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found