Clone Read LE_HBa0096D08_SP6_28958

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0096D08_SP6_28958
Primer
SP6
ID from Seq. Facility
LE_HBa_096_D08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
730 trimmed for vector and quality, 889 raw
Sequence
>LE_HBa0096D08_SP6_28958 (raw untrimmed)
GCGGGCTTTATGCTTGAGAATTATAAAAATAAAATTGAAAACATAAAAGAACTTCCAAGTCATTTAGTTTTGGTATGTGATAAAATAATTGTAGCAAGAA
ATTTTTATTTTATTTAAGTTGAGGTCTATCAAAAATATAATTTTTATTTTATTTAAGTTTAAGGTTTATCAAAAATAAATATTTTATTTTATTTAATTTT
GAGGTCTATTAAAAATAAAAATTTTATTGTTATGAGATGATAGTAAGATATATATCATCTTTTTCAAAATTCACTTTTATTATTACACTAAATATATTAT
CGTTAGATCAAAAATTACTTTGATAGGAACTAAATGCGATACCTCCCTTTTCTTTTATTCTCATTGTGTTAATTATCTTTTTTACATGTTTATTCCATAT
ATAGCAATAAGAAAAGTCGATCTTATGTTATATTCTTATGATCGATCTTTTCTTAATTGAGACATATAAATTTCATTCGTGCTATAATTCTAGCTCCAGT
AATAAAGGTTTTAGTAAAACGTTAATTCTCTTAATATTATGACGTTCAATAATTATAGTCCAATTTTTTATTTAGTACTTTTTTTAAATAATTTTCAGAG
AATTTCATCTCAAAATTTACATATCTTGAAAATCGTGGCGATGAAACTTTAAATTTTGAATTCACTTCTGAATGGAAATGATCCGATTCTCAAATATAAC
CATGAAAAATAATAATTGCTAGTTAAATGAAACTATTCAAAGTAATTTTTTTAGATTAAGAGAGAAAACATATCTTCAAATTTAAAGATTATCATTCTTT
ACCTCATAAAAAAAACTTTTTAAAATTTTAATCATACTAATCGAATATTACCATGTCATTTCTTACCTCATATCATCTTCTAACGAACT
>LE_HBa0096D08_SP6_28958 (trimmed for quality and cloning vector)
ATAAAATTGAAAACATAAAAGAACTTCCAAGTCATTTAGTTTTGGTATGTGATAAAATAATTGTAGCAAGAAATTTTTATTTTATTTAAGTTGAGGTCTA
TCAAAAATATAATTTTTATTTTATTTAAGTTTAAGGTTTATCAAAAATAAATATTTTATTTTATTTAATTTTGAGGTCTATTAAAAATAAAAATTTTATT
GTTATGAGATGATAGTAAGATATATATCATCTTTTTCAAAATTCACTTTTATTATTACACTAAATATATTATCGTTAGATCAAAAATTACTTTGATAGGA
ACTAAATGCGATACCTCCCTTTTCTTTTATTCTCATTGTGTTAATTATCTTTTTTACATGTTTATTCCATATATAGCAATAAGAAAAGTCGATCTTATGT
TATATTCTTATGATCGATCTTTTCTTAATTGAGACATATAAATTTCATTCGTGCTATAATTCTAGCTCCAGTAATAAAGGTTTTAGTAAAACGTTAATTC
TCTTAATATTATGACGTTCAATAATTATAGTCCAATTTTTTATTTAGTACTTTTTTTAAATAATTTTCAGAGAATTTCATCTCAAAATTTACATATCTTG
AAAATCGTGGCGATGAAACTTTAAATTTTGAATTCACTTCTGAATGGAAATGATCCGATTCTCAAATATAACCATGAAAAATAATAATTGCTAGTTAAAT
GAAACTATTCAAAGTAATTTTTTTAGATTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.866562
Expected error %
0.0784058
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0096D08
Clone
Clone name
hba-96d8
LE_HBa0096D08
P096D08
Clone type
BAC
Contamination
none
Estimated length
78,271
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found